DRSC/TRiP Functional Genomics Resources

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Protein Alignment Papss and APK4

DIOPT Version :9

Sequence 1:NP_730460.1 Gene:Papss / 40167 FlyBaseID:FBgn0020389 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_569050.1 Gene:APK4 / 836888 AraportID:AT5G67520 Length:310 Species:Arabidopsis thaliana


Alignment Length:196 Identity:88/196 - (44%)
Similarity:119/196 - (60%) Gaps:20/196 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 RGCTVWLTGLSGAGKTSIAFELEAYLVSRGIPAYGLDGDNIRTGLNKNLGFTPADREENIRRVGE 137
            :||.:|:|||||:||:|:|..|...|.:||..:|.|||||:|.|||.:|.|...||.||||||||
plant   108 KGCVIWITGLSGSGKSSLACALSRALHNRGKLSYILDGDNVRHGLNSDLSFEADDRAENIRRVGE 172

  Fly   138 VAKLFADSGVVAICSFVSPFADDREMARKIHKDAGLKFYEIFVDTPLDVCETRDVKGLYKKAREG 202
            |||||||||::.|.|.:||:..:|...|.:....  .|.|:|:|.||.|||.||.|||||:||.|
plant   173 VAKLFADSGIICIASLISPYRIERAACRALLPQG--DFIEVFMDVPLHVCEARDPKGLYKRARAG 235

  Fly   203 VIKGFTGITQEYERPQMPELVV------------------NTHGYTVRESTQKLVTLLEQEGIIP 249
            .||||||:...||.|...|:|:                  ::...::.|....:|:.|:|.|.:.
plant   236 KIKGFTGVDDPYEAPLDCEIVIQNSRDKGLSSSSSSSSSPSSSSSSLCEMADIVVSYLDQNGYLK 300

  Fly   250 R 250
            :
plant   301 K 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PapssNP_730460.1 APS_kinase 73..228 CDD:279865 83/172 (48%)
sopT 270..648 CDD:273023
ATPS 279..650 CDD:173895
APK4NP_569050.1 NK 88..262 CDD:418433 83/155 (54%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 168 1.000 Domainoid score I1175
eggNOG 1 0.900 - - E1_COG0529
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000913
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100343
Panther 1 1.100 - - O PTHR11055
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X525
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.810

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