DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Papss and APS4

DIOPT Version :9

Sequence 1:NP_730460.1 Gene:Papss / 40167 FlyBaseID:FBgn0020389 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_199191.1 Gene:APS4 / 834400 AraportID:AT5G43780 Length:469 Species:Arabidopsis thaliana


Alignment Length:440 Identity:234/440 - (53%)
Similarity:309/440 - (70%) Gaps:37/440 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 VNTHGYTVRESTQKLVTLLEQEG------IIPRSLRDVDLLPELYPSESIATEALRHEAESLQA- 281
            |:..|.:|:..      |:|.:|      ::..|.|.|                ::||||::.| 
plant    42 VSRRGLSVKSG------LIEPDGGKLMNLVVEESRRRV----------------MKHEAETVPAR 84

  Fly   282 IEISTVELQWVQVLAEGWAYPLRGFMREDEYLQTLHFNTLQSGMDGSYRENHSVPIVLSATQADK 346
            |:::.|:|:||.||:||||.||:||||:.|:|||||||:.:. .|||. .|.||||||:.....|
plant    85 IKLNRVDLEWVHVLSEGWASPLKGFMRQSEFLQTLHFNSFRL-EDGSV-VNMSVPIVLAIDDDQK 147

  Fly   347 DRLDGCSSLTL-KYQGKAVAILRRPEFYFQRKEERLARQFGTSNPNHPYSKQ-VYESGDYLVGGD 409
            .|:...:.:|| ...|..:|||...|.|...||||:||.:||:....||::: :.::|::|:|||
plant   148 FRIGDSNQVTLVDSVGNPIAILNDIEIYKHPKEERIARTWGTTARGLPYAEEAITKAGNWLIGGD 212

  Fly   410 LAVIERIRWEDGLDQYRLTPNELRRRFKELNADAIFAFQLRNPIHNGHALLMQDTRRQLLERGFK 474
            |.|:|.|::.||||::||:|::||..|....|||:||||||||:||||||||.||||:|||.|:|
plant   213 LQVLEPIKYNDGLDRFRLSPSQLREEFIRRGADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYK 277

  Fly   475 QPVLLLHPLGGWTKDDDVPLDVRMKQHQAVLDAGVLRREDTVLAIFPSPMMYAGPTEVQWHAKAR 539
            .|||||:||||:||.|||||..||:||:.||:.|||..|.||::||||||:||||||||||||||
plant   278 NPVLLLNPLGGFTKADDVPLSWRMRQHEKVLEDGVLDPETTVVSIFPSPMLYAGPTEVQWHAKAR 342

  Fly   540 MNAGANFYIVGRDPAGMPHPAKETYPDGNLYDATHGARVLKMAQGLDSMEILPFRVAAYDKSASR 604
            :||||||||||||||||.||.::.    :||||.||.:||.||.||:.:.||||:||||||:..:
plant   343 INAGANFYIVGRDPAGMGHPTEKR----DLYDADHGKKVLSMAPGLERLNILPFKVAAYDKTQGK 403

  Fly   605 MAFFEPKRKDEFEFISGTKMRTLAKTGASPPDGFMEPEAWRILATYYQNL 654
            ||||:|.|..:|.||||||||.|||...:||||||.|..|::|..||.:|
plant   404 MAFFDPSRSQDFLFISGTKMRGLAKKKENPPDGFMCPSGWKVLVDYYDSL 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PapssNP_730460.1 APS_kinase 73..228 CDD:279865 1/3 (33%)
sopT 270..648 CDD:273023 221/380 (58%)
ATPS 279..650 CDD:173895 218/373 (58%)
APS4NP_199191.1 sopT 56..448 CDD:273023 226/413 (55%)
ATPS 84..449 CDD:173895 217/370 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 322 1.000 Domainoid score I273
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 460 1.000 Inparanoid score I369
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D528280at2759
OrthoFinder 1 1.000 - - FOG0000913
OrthoInspector 1 1.000 - - otm3262
orthoMCL 1 0.900 - - OOG6_100343
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X525
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.830

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