DRSC/TRiP Functional Genomics Resources

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Protein Alignment Papss and pps-1

DIOPT Version :10

Sequence 1:NP_730460.1 Gene:Papss / 40167 FlyBaseID:FBgn0020389 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_001293960.1 Gene:pps-1 / 177893 WormBaseID:WBGene00004091 Length:654 Species:Caenorhabditis elegans


Alignment Length:661 Identity:359/661 - (54%)
Similarity:463/661 - (70%) Gaps:35/661 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 NNNNSACCAASPKRSCLPSVEKPEDACLQ-VATNVTEQKHHVTRETRGKNLGLCRGFRGCTVWLT 80
            ||...|          :|.::||..:.|. .:||:|.|:|.::||.|...:|...||||||:|.|
 Worm     8 NNEGDA----------MPMLKKPRYSSLSGQSTNITYQEHTISREERAAAVGRHEGFRGCTIWFT 62

  Fly    81 GLSGAGKTSIAFELEAYLVSRGIPAYGLDGDNIRTGLNKNLGFTPADREENIRRVGEVAKLFADS 145
            ||||||||:|:|.||..|...|||.|||||||||.||.|||||:..||:||||||.|||||||||
 Worm    63 GLSGAGKTTISFALERTLNKLGIPCYGLDGDNIRHGLCKNLGFSKEDRQENIRRVAEVAKLFADS 127

  Fly   146 GVVAICSFVSPFADDREMARKIHKDAGLKFYEIFVDTPLDVCETRDVK--GLYKKAREGVIKGFT 208
            |::.:.:|:|||.:||..|||||:...:||.|:.|.|.|:|||.||.|  .||||||.|.|.|||
 Worm   128 GMICLAAFISPFQEDRLDARKIHESENVKFIEVHVSTTLEVCEQRDPKPSELYKKARAGQILGFT 192

  Fly   209 GITQEYERPQMPELVVNTHGYTVRESTQKLVTLLEQEGIIPRSLRDVDLLPELYPSESIATEALR 273
            ||...||.|:..|::::.....|::..||::..||.:|::|..:.||..:.||:.|:.:....|.
 Worm   193 GIDSAYEPPENAEIILDAGKDGVQQCVQKVLDHLESKGLLPEQIPDVPAVRELFVSDDLTVAELL 257

  Fly   274 HEAESLQAIEISTVELQWVQVLAEGWAYPLRGFMREDEYLQTLHFNTLQS--------GMDGSYR 330
            .|:::|..:|::.|:|||:||||||||.||.|||||.:|||::||..|..        |.....:
 Worm   258 KESQNLPTVELTKVDLQWLQVLAEGWATPLSGFMRERQYLQSMHFGQLLDLKHKVAFVGEKSDDK 322

  Fly   331 E---------NHSVPIVLSATQADKDRLDGCSSLTLKYQGKAVAILRRPEFYFQRKEERLARQFG 386
            |         |.|:||||..:...|..|:|.:.:.|||.|:..|||..||.:..||:||:.||||
 Worm   323 EDSWPMMDDINQSIPIVLPISDDVKKGLEGVTRIALKYNGQVYAILSDPEIFEHRKDERVCRQFG 387

  Fly   387 TSNPNHPYSKQVYESGDYLVGGDLAVIERIRWEDGLDQYRLTPNELRRRFKELNADAIFAFQLRN 451
            |::|.||...||.|||::|:|||:||:::|::.||||:||.||||||..|.|.||||:|||||||
 Worm   388 TNDPRHPAVAQVLESGNWLLGGDVAVVQKIQFNDGLDKYRKTPNELRAIFAEKNADAVFAFQLRN 452

  Fly   452 PIHNGHALLMQDTRRQLLERGFKQPVLLLHPLGGWTKDDDVPLDVRMKQHQAVLDAGVLRREDTV 516
            ||||||||||:|||.:||.. .|.|:||||||||||||||||||:|:|||:||:...||..|.||
 Worm   453 PIHNGHALLMRDTREKLLAE-HKNPILLLHPLGGWTKDDDVPLDIRIKQHEAVIAERVLDPEWTV 516

  Fly   517 LAIFPSPMMYAGPTEVQWHAKARMNAGANFYIVGRDPAGMPHPAKETYPDGNLYDATHGARVLKM 581
            |:||||||||||||||||||::|:.||...|||||||||:..|..   ||. ||:.||||:||.|
 Worm   517 LSIFPSPMMYAGPTEVQWHARSRIAAGIQHYIVGRDPAGIQKPGS---PDA-LYETTHGAKVLSM 577

  Fly   582 AQGLDSMEILPFRVAAYDKSASRMAFFEPKRKDEFEFISGTKMRTLAKTGASPPDGFMEPEAWRI 646
            |.||.::.|||||||||||:|.:|:||:..||::||.|||||||.||:.|.:||:|||.|.||.:
 Worm   578 APGLSALHILPFRVAAYDKTAKKMSFFDTSRKEDFENISGTKMRGLARNGDTPPEGFMAPTAWEV 642

  Fly   647 LATYYQNLPQS 657
            ||.||::|..|
 Worm   643 LAGYYKSLQNS 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PapssNP_730460.1 CysC 55..249 CDD:440295 109/195 (56%)
ATPS 279..650 CDD:173895 227/387 (59%)
pps-1NP_001293960.1 CysC 37..233 CDD:440295 109/195 (56%)
ATPS 263..646 CDD:173895 227/387 (59%)

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