DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trc and ROCK2

DIOPT Version :9

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:XP_005246247.1 Gene:ROCK2 / 9475 HGNCID:10252 Length:1417 Species:Homo sapiens


Alignment Length:444 Identity:164/444 - (36%)
Similarity:250/444 - (56%) Gaps:79/444 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 GERKQRLAKLEAQLKD-------ESLSE------------AQRQEKRLQHAQKETEYL--RLKRL 86
            |..:||  ||||.::|       |||.:            |.|:.|.:.:.....|.:  :::.|
Human    23 GASRQR--KLEALIRDPRSPINVESLLDGLNSLVLDLDFPALRKNKNIDNFLNRYEKIVKKIRGL 85

  Fly    87 RLGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAERDVLVEADHQ 151
            ::..||::.:|||||||||||:||:.|.:..|||||:|.|.:|:::...|....|||::..|:..
Human    86 QMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 150

  Fly   152 WVVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKLGFIHRD 216
            |||:::|:|||...||::||::||||::.|:...| :.|:..:||.:|..||:|:||.:|.||||
Human   151 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWAKFYTAEVVLALDAIHSMGLIHRD 214

  Fly   217 IKPDNLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIGTCASLSCSPMDSKRRAES 281
            :||||:|||..|||||:|||.|..:.::                     ..:.|.          
Human   215 VKPDNMLLDKHGHLKLADFGTCMKMDET---------------------GMVHCD---------- 248

  Fly   282 WKRNRRALAYSTVGTPDYIAPEVFLQTG----YGPACDWWSLGVIMYEMLMGYPPFCSDNPQDTY 342
                      :.|||||||:|||....|    ||..|||||:||.:||||:|..||.:|:...||
Human   249 ----------TAVGTPDYISPEVLKSQGGDGFYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY 303

  Fly   343 RKVMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLKSVPFFRGVD--WEHIRER 405
            .|:|:.:.:|.||.:..||:.||..|..|..:.:.||| :.|:|:::..|||:...  |::|||.
Human   304 SKIMDHKNSLCFPEDAEISKHAKNLICAFLTDREVRLG-RNGVEEIRQHPFFKNDQWHWDNIRET 367

  Fly   406 PAAIPVEVRSIDDTSNFDEFPDVSLEIPSAPIPQ---GGEIAKDWVFINYTYKR 456
            .|.:..|:.|..|:||||:..|...::.:.|||:   |.::.    ||.:||.|
Human   368 AAPVVPELSSDIDSSNFDDIEDDKGDVETFPIPKAFVGNQLP----FIGFTYYR 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 OmpH 16..>85 CDD:214922 15/62 (24%)
STKc_NDR_like 91..455 CDD:270750 146/372 (39%)
ROCK2XP_005246247.1 STKc_ROCK2 39..417 CDD:270771 155/424 (37%)
S_TKc 92..354 CDD:214567 122/304 (40%)
SCP-1 412..1080 CDD:114219 3/6 (50%)
HR1_ROCK2 505..571 CDD:212028
Rho_Binding 979..1046 CDD:286056
PH_ROCK 1151..1257 CDD:269948
C1 1261..1307 CDD:237996
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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