DRSC/TRiP Functional Genomics Resources

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Protein Alignment trc and CBK1

DIOPT Version :9

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_014238.3 Gene:CBK1 / 855561 SGDID:S000005105 Length:756 Species:Saccharomyces cerevisiae


Alignment Length:474 Identity:236/474 - (49%)
Similarity:320/474 - (67%) Gaps:39/474 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 TLDKATKAKVTLENYYSNLVTQYGERKQRLAKLEAQLKDESLSEAQRQEKRLQHAQKETEYLRLK 84
            |.|||...|:.:||:|.:.|....||.:|..:||.:|...:.||.::..:.....:||:::|||:
Yeast   279 TQDKAAAVKLKIENFYQSSVKYAIERNERRVELETELTSHNWSEERKSRQLSSLGKKESQFLRLR 343

  Fly    85 RLRLGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAERDVLVEAD 149
            |.||.:|||..:||||:|||||||||||||||.:||||.|.|::|.:|:|:|||:||||||..:|
Yeast   344 RTRLSLEDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMYKKDQLAHVKAERDVLAGSD 408

  Fly   150 HQWVVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKLGFIH 214
            ..|||.:||||||...||||||||||||:||:|::....:|:.|:||::|..|||::||||||||
Yeast   409 SPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIRWQLFTEDVTRFYMAECILAIETIHKLGFIH 473

  Fly   215 RDIKPDNLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQ--------AKPSDFIGTCA----- 266
            |||||||:|:|.|||:|||||||.||..|:|.:::|:.|.|        :||..:.....     
Yeast   474 RDIKPDNILIDIRGHIKLSDFGLSTGFHKTHDSNYYKKLLQQDEATNGISKPGTYNANTTDTANK 538

  Fly   267 -------SLSCSPMDSKRRAESWKRNRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMY 324
                   |:|.: |.::::.::|:::||.:||||||||||||||:||..|||..|||||||.|||
Yeast   539 RQTMVVDSISLT-MSNRQQIQTWRKSRRLMAYSTVGTPDYIAPEIFLYQGYGQECDWWSLGAIMY 602

  Fly   325 EMLMGYPPFCSDNPQDTYRKVMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLK 389
            |.|:|:|||||:.||:||||:||:.:||.||.:|.||.||::.|......||:|||...|.:::|
Yeast   603 ECLIGWPPFCSETPQETYRKIMNFEQTLQFPDDIHISYEAEDLIRRLLTHADQRLGRHGGADEIK 667

  Fly   390 SVPFFRGVDWEHIRERPAAIPVEVRSIDDTSNFDEFPDVSLE-IPSAP------------IPQGG 441
            |.||||||||..||:..|....::.||.|| .|  ||...|| :|.:|            ..|||
Yeast   668 SHPFFRGVDWNTIRQVEAPYIPKLSSITDT-RF--FPTDELENVPDSPAMAQAAKQREQMTKQGG 729

  Fly   442 E--IAKDWVFINYTYKRFE 458
            .  :.:|..||.|||.||:
Yeast   730 SAPVKEDLPFIGYTYSRFD 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 OmpH 16..>85 CDD:214922 22/64 (34%)
STKc_NDR_like 91..455 CDD:270750 208/398 (52%)
CBK1NP_014238.3 STKc_NDR_like_fungal 350..748 CDD:270778 210/401 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346105
Domainoid 1 1.000 219 1.000 Domainoid score I466
eggNOG 1 0.900 - - E1_KOG0605
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 455 1.000 Inparanoid score I246
Isobase 1 0.950 - 0 Normalized mean entropy S373
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000273
OrthoInspector 1 1.000 - - oto98945
orthoMCL 1 0.900 - - OOG6_100850
Panther 1 1.100 - - LDO PTHR24356
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R870
SonicParanoid 1 1.000 - - X595
TreeFam 1 0.960 - -
1413.730

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