DRSC/TRiP Functional Genomics Resources

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Protein Alignment trc and Prkci

DIOPT Version :10

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_114448.1 Gene:Prkci / 84006 RGDID:620961 Length:596 Species:Rattus norvegicus


Alignment Length:377 Identity:124/377 - (32%)
Similarity:194/377 - (51%) Gaps:72/377 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 LGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAERDVLVEA-DHQ 151
            ||::||:.|:|||||::.:|.||:.|.|..:|||||::|..:.:.|.:..|:.|:.|..:| :|.
  Rat   249 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 313

  Fly   152 WVVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKLGFIHRD 216
            ::|.::..||....|:.::|::.|||:|..:.::..|.||..:||.:|.:||::.:|:.|.|:||
  Rat   314 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRD 378

  Fly   217 IKPDNLLLDARGHLKLSDFGLC-TGLKKSHRTDFYRDLSQAKPSDFIGT-CASLSCSPMDSKRRA 279
            :|.||:|||:.||:||:|:|:| .||               :|.|...| |              
  Rat   379 LKLDNVLLDSEGHIKLTDYGMCKEGL---------------RPGDTTSTFC-------------- 414

  Fly   280 ESWKRNRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPF----CSDNP-Q 339
                           |||:|||||:.....||.:.|||:|||:|:||:.|..||    .|||| |
  Rat   415 ---------------GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 464

  Fly   340 DTYRKVMNWRETLIFPP------EIP--ISEEAKETIINFC-CEADRRLG--SQRGLEDLKSVPF 393
            :|        |..:|..      .||  :|.:|...:.:|. .:...|||  .|.|..|::..||
  Rat   465 NT--------EDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF 521

  Fly   394 FRGVDWEHIRERPAAIPVEVRSIDDTSNFDEFPDVSLEIPSAPIPQGGEIAK 445
            ||.|||: :.|:...:|....:|......|.|.......|....|...:|.:
  Rat   522 FRNVDWD-MMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLTPDDDDIVR 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 MobB_Trc-like 24..88 CDD:439274 124/377 (33%)
STKc_NDR_like 91..455 CDD:270750 122/374 (33%)
PrkciNP_114448.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Regulatory domain. /evidence=ECO:0000250 2..253 2/3 (67%)
Required for interaction with RAB2. /evidence=ECO:0000250 2..28
PB1_aPKC 26..108 CDD:99725
Interaction with PARD6A. /evidence=ECO:0000250 72..91
Pseudosubstrate. /evidence=ECO:0000250 125..134
C1_aPKC 139..193 CDD:410344
STKc_aPKC_iota 233..596 CDD:270769 124/377 (33%)
Blue background indicates that the domain is not in the aligned region.

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