DRSC/TRiP Functional Genomics Resources

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Protein Alignment trc and AT1G30640

DIOPT Version :9

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_001321465.1 Gene:AT1G30640 / 839944 AraportID:AT1G30640 Length:562 Species:Arabidopsis thaliana


Alignment Length:456 Identity:217/456 - (47%)
Similarity:300/456 - (65%) Gaps:21/456 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SDHTLDKATKAKVTLENYYSNLVTQYGERKQRLAKLEAQLKDESLSEAQRQEKRLQHAQKETEYL 81
            |:.|..|...||..:||:|........|||:|.:.||..|.|..::...:.:......:||.||:
plant    44 SNATKQKVAAAKQYIENHYKIQKKSLQERKERRSILEQNLADADVTVEDKMDILKNFEKKEMEYM 108

  Fly    82 RLKRLRLGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAERDVLV 146
            ||:|.::||:|||.|.:||||||||||:.::|.||.|||||.|:|::||.:.||.||:|||:||.
plant   109 RLQRQKMGVDDFELLSIIGRGAFGEVRICKEKSTGSVYAMKKLKKSEMLRRGQVEHVKAERNVLA 173

  Fly   147 EADHQWVVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKLG 211
            |.|..::||:.|||||..:||||||:|||||||||||:||||.|:.|:||:::|.|||:||||..
plant   174 EVDSPFIVKLCYSFQDDEHLYLIMEYLPGGDMMTLLMRKDTLREDETRFYVAQTILAIESIHKHN 238

  Fly   212 FIHRDIKPDNLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDL--SQAKPS---DFIGTCASLSCS 271
            ::||||||||||:...||:|||||||...|:..:..||..:|  ...||:   |.:.       .
plant   239 YVHRDIKPDNLLITRNGHIKLSDFGLSKSLESKNFPDFKAELVDRSTKPAAEHDRLS-------K 296

  Fly   272 PMDSKRRAES-----WKRNRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYP 331
            |..:.||.:.     |::|||.||:|||||||||||||.|:.|||..|||||||.||:|||:|:|
plant   297 PPSAPRRTQQEQLLHWQQNRRTLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMFEMLVGFP 361

  Fly   332 PFCSDNPQDTYRKVMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLKSVPFFRG 396
            ||.|:.|..|.||::||:..|.||.|..:|.|.|:.|....|..::|||: :|:.::|:.|:|||
plant   362 PFYSEEPLATCRKIVNWKTCLKFPDEAKLSIEVKDLIRRLLCNVEQRLGT-KGVHEIKAHPWFRG 425

  Fly   397 VDWEHIRERPAAIPVEVRSIDDTSNFDEFPDV--SLEIPSAPIPQGGEI-AKDWVFINYTYKRFE 458
            |:||.:.|..|....:|:...||.||::|.:|  :.:..|...|....| :||..|:.||:|..|
plant   426 VEWERLYESNAPYIPQVKHELDTQNFEKFDEVPSTCQTSSKSSPWRKMISSKDANFLGYTFKNLE 490

  Fly   459 V 459
            :
plant   491 I 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 OmpH 16..>85 CDD:214922 22/67 (33%)
STKc_NDR_like 91..455 CDD:270750 190/376 (51%)
AT1G30640NP_001321465.1 STKc_NDR_like 118..487 CDD:270750 190/376 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 330 1.000 Domainoid score I262
eggNOG 1 0.900 - - E1_KOG0605
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 429 1.000 Inparanoid score I419
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 1 1.000 - - FOG0000273
OrthoInspector 1 1.000 - - otm2526
orthoMCL 1 0.900 - - OOG6_100850
Panther 1 1.100 - - O PTHR24356
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X595
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

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