DRSC/TRiP Functional Genomics Resources

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Protein Alignment trc and AT1G03920

DIOPT Version :10

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_171888.1 Gene:AT1G03920 / 839369 AraportID:AT1G03920 Length:569 Species:Arabidopsis thaliana


Alignment Length:463 Identity:231/463 - (49%)
Similarity:301/463 - (65%) Gaps:24/463 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DGASIRFSDHTLDKATKAKVTLENYYSNLVTQYGERKQRLAKLEAQLKDESLSEAQRQEKRLQHA 74
            ||.::  |:.|..|...||..:||:|...:....|||:|...||.:|.|..:.|..:........
plant    56 DGEAL--SNSTKQKVAAAKQYIENHYKEQMKNLNERKERRTTLEKKLADADVCEEDQTNLMKFLE 118

  Fly    75 QKETEYLRLKRLRLGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVR 139
            :|||||:||:|.::|.:|||.|.:||:|||||||:|::.:||||:|||.|:|::||.:.||.|||
plant   119 KKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVVREINTGHVFAMKKLKKSEMLRRGQVEHVR 183

  Fly   140 AERDVLVEADHQWVVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAI 204
            |||::|.|.|...:||:|.||||...||||||:|||||||||||:||||||:..:|||:|:.|||
plant   184 AERNLLAEVDSNCIVKLYCSFQDNEYLYLIMEYLPGGDMMTLLMRKDTLSEDEAKFYIAESVLAI 248

  Fly   205 DSIHKLGFIHRDIKPDNLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFI------- 262
            :|||...:|||||||||||||..|||:|||||||..|          |.|.....||.       
plant   249 ESIHNRNYIHRDIKPDNLLLDRYGHLRLSDFGLCKPL----------DCSVIDGEDFTVGNAGSG 303

  Fly   263 GTCASLSCSPMDSKR-RAESWKRNRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEM 326
            |...|:|.:|..|:: :.|.|::|||.||||||||||||||||.|:.|||..|||||||.|||||
plant   304 GGSESVSTTPKRSQQEQLEHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 368

  Fly   327 LMGYPPFCSDNPQDTYRKVMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLKSV 391
            |:|||||.:|:|..|.||::||:..|.||.|..:|..|::.|....|..::|||| .|...:|:.
plant   369 LVGYPPFYADDPMSTCRKIVNWKTHLKFPEESRLSRGARDLIGKLLCSVNQRLGS-TGASQIKAH 432

  Fly   392 PFFRGVDWEHIRERPAAIPVEVRSIDDTSNFDEF--PDVSLEIPSAPIPQGGEI-AKDWVFINYT 453
            |:|.||.||.|.:..||...||....||.||::|  .|...:.||...|....: :||..|:.||
plant   433 PWFEGVQWEKIYQMEAAFIPEVNDDLDTQNFEKFDEEDNQTQAPSRTGPWRKMLSSKDINFVGYT 497

  Fly   454 YKRFEVRN 461
            ||.||:.|
plant   498 YKNFEIVN 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 MobB_Trc-like 24..88 CDD:439274 22/63 (35%)
STKc_NDR_like 91..455 CDD:270750 198/374 (53%)
AT1G03920NP_171888.1 MobB_NDR_LATS-like 71..132 CDD:439267 22/60 (37%)
STKc_NDR_like 135..499 CDD:270750 198/374 (53%)

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