DRSC/TRiP Functional Genomics Resources

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Protein Alignment trc and AT5G40030

DIOPT Version :10

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_198819.1 Gene:AT5G40030 / 834000 AraportID:AT5G40030 Length:499 Species:Arabidopsis thaliana


Alignment Length:456 Identity:131/456 - (28%)
Similarity:216/456 - (47%) Gaps:70/456 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 EAQL-KDESLSEAQRQEKRL-----QHAQKETEYLRLKRLR------LGVEDFEALKVIGRGAFG 105
            ||.| |.:|....:...||:     .|...:..:..::.::      ||:..|..||.:|.|..|
plant    62 EANLEKTQSFDANEANFKRVFAPSKPHKGNDLRWDAIQNVKCSKNEDLGLGHFRLLKKLGCGDIG 126

  Fly   106 EVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYYSFQDPVNLYLIM 170
            .|.|.:.::.|..:||||:.|..::.::::...:.||::|...||.::..:|..|:......|:|
plant   127 SVYLAELREMGCFFAMKVMDKGMLIGRKKLVRAQTEREILGLLDHPFLPTLYSHFETEKFSCLLM 191

  Fly   171 EFLPGGDMMTLLMKK--DTLSEEGTQFYISETALAIDSIHKLGFIHRDIKPDNLLLDARGHLKLS 233
            ||..|||:..|..|:  ...||...:||.||..||::.:|.:|.::||:||:|:::...||:.||
plant   192 EFCSGGDLHILRQKQPGKHFSELAARFYASEVLLALEYLHMMGVVYRDLKPENVMVREDGHIMLS 256

  Fly   234 DFGLCTGLKKSHRTDFYRDLSQAKPSDFIGT------CASLSCS-PM--------------DSKR 277
            ||.|  .|:........:..||  ||..|.:      |...||. |:              :..|
plant   257 DFDL--SLQSFVSPTLIQSTSQ--PSCHIASYCIQPPCIDPSCKLPVACIQPSCFKPRFLNNKPR 317

  Fly   278 RAESWKRNRRAL-----------AYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYP 331
            :|::.|....:|           :.|.|||.:|:|||:....|:|.:.|||:.|:.:||:|.|..
plant   318 KAKTEKAGSDSLPMLIAEPTAARSMSFVGTHEYLAPEIIRGDGHGSSVDWWTFGIFLYELLTGKT 382

  Fly   332 PFCSDNPQDTYRKVMNWRETLIFPPEIPISEEAKETIINFCC-EADRRLGSQRGLEDLKSVPFFR 395
            ||..:..::|...|:.  :.|.| ||..||..||:.|..... :..:|||.::|..::|..|||.
plant   383 PFKGNGNRETLFNVVG--QPLKF-PEGSISFAAKDLIRGLLTKDPKKRLGFKKGATEIKQHPFFN 444

  Fly   396 GVDWEHIRE-RPAAIPVEVRSIDDTSNFDEFPDVSL--EIPSAPIPQGGEIAKDWVFINYTYKRF 457
            .|:|..||. .|..||..:             |:|:  |...:.:.|.|:.:|.....:..|..|
plant   445 NVNWALIRSTTPPEIPKPI-------------DLSILNETLKSSVQQQGKHSKQSDSSSGPYLDF 496

  Fly   458 E 458
            |
plant   497 E 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 MobB_Trc-like 24..88 CDD:439274 8/46 (17%)
STKc_NDR_like 91..455 CDD:270750 118/401 (29%)
AT5G40030NP_198819.1 STKc_phototropin_like 113..464 CDD:270726 112/370 (30%)
Keratin_B2_2 267..309 CDD:464017 9/43 (21%)

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