DRSC/TRiP Functional Genomics Resources

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Protein Alignment trc and AT5G09890

DIOPT Version :10

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_001031863.1 Gene:AT5G09890 / 830849 AraportID:AT5G09890 Length:516 Species:Arabidopsis thaliana


Alignment Length:453 Identity:222/453 - (49%)
Similarity:307/453 - (67%) Gaps:13/453 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 TLDKATKAKVTLENYYSNLVTQYGERKQRLAKLEAQLKDESLSEAQRQEKRLQHAQKETEYLRLK 84
            |..||..||..:||:|.|.:....||.:|..:.:.::::..|...::.|.....|::||||:||:
plant    29 TRQKAAAAKQFIENHYKNYLQGLHERMERRREFQRKVQEAQLPVEEQDEMMRNLARRETEYMRLQ 93

  Fly    85 RLRLGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAERDVLVEAD 149
            |.::|::|||.|.|||:||||||||.:.:.|..|||||.|:|.:||.:.||.|||:||::|.|.|
plant    94 RRKIGIDDFELLTVIGKGAFGEVRLCRLRSTSEVYAMKKLKKTEMLSRGQVEHVRSERNLLAEVD 158

  Fly   150 HQWVVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKLGFIH 214
            .:::||::|||||...||||||:|||||:|||||::|.|||:..:|||:|:.|||.|||:..::|
plant   159 SRYIVKLFYSFQDSECLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESILAIHSIHQHNYVH 223

  Fly   215 RDIKPDNLLLDARGHLKLSDFGLCTGLKKSHRTDFYRD---LSQAKPSDFIGTCASLSCSPMDSK 276
            ||||||||:||..|||||||||||..|...:.:....|   |||...:....:.|..:...| .|
plant   224 RDIKPDNLILDKSGHLKLSDFGLCKPLDDKYSSLLLEDDEMLSQDSENQSGKSDADKAPWQM-PK 287

  Fly   277 RRAESWKRNRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDNPQDT 341
            .:...|||||||||||||||.||:||||.|:.|||..|||||||.|:||||:||||||||:|:.|
plant   288 EQLLQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAILYEMLVGYPPFCSDDPRIT 352

  Fly   342 YRKVMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLKSVPFFRGVDWEHIRERP 406
            .||::|||..|.||.|..||:||::.|....|:.|.|||: ||:|::||.|:|:|..|:.:.:..
plant   353 CRKIINWRVCLKFPEEPKISDEARDLICRLLCDVDSRLGT-RGVEEIKSHPWFKGTPWDKLYDME 416

  Fly   407 AAIPVEVRSIDDTSNFDEFPDVSLEIPSAPIPQGGE-----IAKDWVFINYTYKRFEV-RNLE 463
            ||....|....||.||::||:|  |...:..||.|.     .:||..||.:|:|:.:: |::|
plant   417 AAYRPIVDGELDTQNFEKFPEV--EGSPSEAPQVGPWRKMLTSKDTNFIGFTFKKSDITRSME 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 MobB_Trc-like 24..88 CDD:439274 20/63 (32%)
STKc_NDR_like 91..455 CDD:270750 196/371 (53%)
AT5G09890NP_001031863.1 MobB_NDR_LATS-like 36..97 CDD:439267 19/60 (32%)
STKc_NDR_like 100..468 CDD:270750 196/371 (53%)

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