DRSC/TRiP Functional Genomics Resources

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Protein Alignment trc and AT5G09890

DIOPT Version :9

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_001031863.1 Gene:AT5G09890 / 830849 AraportID:AT5G09890 Length:516 Species:Arabidopsis thaliana


Alignment Length:453 Identity:222/453 - (49%)
Similarity:307/453 - (67%) Gaps:13/453 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 TLDKATKAKVTLENYYSNLVTQYGERKQRLAKLEAQLKDESLSEAQRQEKRLQHAQKETEYLRLK 84
            |..||..||..:||:|.|.:....||.:|..:.:.::::..|...::.|.....|::||||:||:
plant    29 TRQKAAAAKQFIENHYKNYLQGLHERMERRREFQRKVQEAQLPVEEQDEMMRNLARRETEYMRLQ 93

  Fly    85 RLRLGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAERDVLVEAD 149
            |.::|::|||.|.|||:||||||||.:.:.|..|||||.|:|.:||.:.||.|||:||::|.|.|
plant    94 RRKIGIDDFELLTVIGKGAFGEVRLCRLRSTSEVYAMKKLKKTEMLSRGQVEHVRSERNLLAEVD 158

  Fly   150 HQWVVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKLGFIH 214
            .:::||::|||||...||||||:|||||:|||||::|.|||:..:|||:|:.|||.|||:..::|
plant   159 SRYIVKLFYSFQDSECLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESILAIHSIHQHNYVH 223

  Fly   215 RDIKPDNLLLDARGHLKLSDFGLCTGLKKSHRTDFYRD---LSQAKPSDFIGTCASLSCSPMDSK 276
            ||||||||:||..|||||||||||..|...:.:....|   |||...:....:.|..:...| .|
plant   224 RDIKPDNLILDKSGHLKLSDFGLCKPLDDKYSSLLLEDDEMLSQDSENQSGKSDADKAPWQM-PK 287

  Fly   277 RRAESWKRNRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDNPQDT 341
            .:...|||||||||||||||.||:||||.|:.|||..|||||||.|:||||:||||||||:|:.|
plant   288 EQLLQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAILYEMLVGYPPFCSDDPRIT 352

  Fly   342 YRKVMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLKSVPFFRGVDWEHIRERP 406
            .||::|||..|.||.|..||:||::.|....|:.|.|||: ||:|::||.|:|:|..|:.:.:..
plant   353 CRKIINWRVCLKFPEEPKISDEARDLICRLLCDVDSRLGT-RGVEEIKSHPWFKGTPWDKLYDME 416

  Fly   407 AAIPVEVRSIDDTSNFDEFPDVSLEIPSAPIPQGGE-----IAKDWVFINYTYKRFEV-RNLE 463
            ||....|....||.||::||:|  |...:..||.|.     .:||..||.:|:|:.:: |::|
plant   417 AAYRPIVDGELDTQNFEKFPEV--EGSPSEAPQVGPWRKMLTSKDTNFIGFTFKKSDITRSME 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 OmpH 16..>85 CDD:214922 21/64 (33%)
STKc_NDR_like 91..455 CDD:270750 196/371 (53%)
AT5G09890NP_001031863.1 STKc_NDR_like 100..468 CDD:270750 196/371 (53%)
S_TKc 102..404 CDD:214567 173/303 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 330 1.000 Domainoid score I262
eggNOG 1 0.900 - - E1_KOG0605
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56033
Inparanoid 1 1.050 429 1.000 Inparanoid score I419
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 1 1.000 - - FOG0000273
OrthoInspector 1 1.000 - - otm2526
orthoMCL 1 0.900 - - OOG6_100850
Panther 1 1.100 - - O PTHR24356
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X595
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.830

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