DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trc and AT3G23310

DIOPT Version :10

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_188973.2 Gene:AT3G23310 / 821911 AraportID:AT3G23310 Length:568 Species:Arabidopsis thaliana


Alignment Length:460 Identity:226/460 - (49%)
Similarity:303/460 - (65%) Gaps:15/460 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GASIRFSDHTLDKATKAKVTLENYYSNLVTQYGERKQRLAKLEAQLKDESLSEAQRQEKRLQHAQ 75
            |.....|:.|..||..||..:||:|...|....:||:|...||.:|....:||.:::.......:
plant    38 GGEEAVSNVTKQKAAAAKQYIENHYKKQVQSQQQRKERRDMLENKLAAAEVSEEEQKNLLKDLEK 102

  Fly    76 KETEYLRLKRLRLGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRA 140
            |||||:|.:|.::|.:|||.|.:||:|||||||:.::|.||:|||||.|:|::||.:.||.||:|
plant   103 KETEYMRRQRHKMGTDDFEPLTMIGKGAFGEVRICREKTTGNVYAMKKLKKSEMLRRGQVEHVKA 167

  Fly   141 ERDVLVEADHQWVVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAID 205
            ||::|.|.|...:||:|.||||...||||||:|||||||||||:||||:|:..:||:.||.|||:
plant   168 ERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIE 232

  Fly   206 SIHKLGFIHRDIKPDNLLLDARGHLKLSDFGLCTGLKKS--HRTDFY--RDLSQAKPSDFIGTCA 266
            ||||..:|||||||||||||..||:||||||||..|..|  ...||.  .:||.|..||......
plant   233 SIHKHNYIHRDIKPDNLLLDRSGHMKLSDFGLCKPLDCSILQEKDFVVAHNLSGALQSDGRPVAP 297

  Fly   267 SLSCSPMDSKRRAESWKRNRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYP 331
            ..:.|.|:   :.::|:||||.||||||||||||||||.|:.|||..|||||||.||||||:|:|
plant   298 RRTRSQME---QLQNWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGFP 359

  Fly   332 PFCSDNPQDTYRKVMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLKSVPFFRG 396
            ||.||.|..|.||::||:..|.||.|:.:|.|||:.|....|..::|:|: :|..::|..|:|.|
plant   360 PFYSDEPMTTCRKIVNWKNYLKFPDEVRLSPEAKDLICRLLCNVEQRIGT-KGANEIKEHPWFSG 423

  Fly   397 VDWEHIRERPAAIPVEVRSIDDTSNFDEFPDVSLEIPSAPIPQGGE-----IAKDWVFINYTYKR 456
            |:||.:.:..||...:|....||.||::|.:...::|..  |:.|.     .:||..|:.||||.
plant   424 VEWEKLYQMKAAFIPQVNDELDTQNFEKFEETDKQVPKT--PKSGPWRKMLSSKDINFVGYTYKN 486

  Fly   457 FEVRN 461
            .|:.|
plant   487 VEIVN 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 MobB_Trc-like 24..88 CDD:439274 22/63 (35%)
STKc_NDR_like 91..455 CDD:270750 195/372 (52%)
AT3G23310NP_188973.2 MobB_NDR_LATS-like 54..115 CDD:439267 21/60 (35%)
STKc_NDR_like 118..485 CDD:270750 195/372 (52%)

Return to query results.
Submit another query.