DRSC/TRiP Functional Genomics Resources

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Protein Alignment trc and AT3G23310

DIOPT Version :9

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_188973.2 Gene:AT3G23310 / 821911 AraportID:AT3G23310 Length:568 Species:Arabidopsis thaliana


Alignment Length:460 Identity:226/460 - (49%)
Similarity:303/460 - (65%) Gaps:15/460 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GASIRFSDHTLDKATKAKVTLENYYSNLVTQYGERKQRLAKLEAQLKDESLSEAQRQEKRLQHAQ 75
            |.....|:.|..||..||..:||:|...|....:||:|...||.:|....:||.:::.......:
plant    38 GGEEAVSNVTKQKAAAAKQYIENHYKKQVQSQQQRKERRDMLENKLAAAEVSEEEQKNLLKDLEK 102

  Fly    76 KETEYLRLKRLRLGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRA 140
            |||||:|.:|.::|.:|||.|.:||:|||||||:.::|.||:|||||.|:|::||.:.||.||:|
plant   103 KETEYMRRQRHKMGTDDFEPLTMIGKGAFGEVRICREKTTGNVYAMKKLKKSEMLRRGQVEHVKA 167

  Fly   141 ERDVLVEADHQWVVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAID 205
            ||::|.|.|...:||:|.||||...||||||:|||||||||||:||||:|:..:||:.||.|||:
plant   168 ERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIE 232

  Fly   206 SIHKLGFIHRDIKPDNLLLDARGHLKLSDFGLCTGLKKS--HRTDFY--RDLSQAKPSDFIGTCA 266
            ||||..:|||||||||||||..||:||||||||..|..|  ...||.  .:||.|..||......
plant   233 SIHKHNYIHRDIKPDNLLLDRSGHMKLSDFGLCKPLDCSILQEKDFVVAHNLSGALQSDGRPVAP 297

  Fly   267 SLSCSPMDSKRRAESWKRNRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYP 331
            ..:.|.|:   :.::|:||||.||||||||||||||||.|:.|||..|||||||.||||||:|:|
plant   298 RRTRSQME---QLQNWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGFP 359

  Fly   332 PFCSDNPQDTYRKVMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLKSVPFFRG 396
            ||.||.|..|.||::||:..|.||.|:.:|.|||:.|....|..::|:|: :|..::|..|:|.|
plant   360 PFYSDEPMTTCRKIVNWKNYLKFPDEVRLSPEAKDLICRLLCNVEQRIGT-KGANEIKEHPWFSG 423

  Fly   397 VDWEHIRERPAAIPVEVRSIDDTSNFDEFPDVSLEIPSAPIPQGGE-----IAKDWVFINYTYKR 456
            |:||.:.:..||...:|....||.||::|.:...::|..  |:.|.     .:||..|:.||||.
plant   424 VEWEKLYQMKAAFIPQVNDELDTQNFEKFEETDKQVPKT--PKSGPWRKMLSSKDINFVGYTYKN 486

  Fly   457 FEVRN 461
            .|:.|
plant   487 VEIVN 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 OmpH 16..>85 CDD:214922 24/68 (35%)
STKc_NDR_like 91..455 CDD:270750 195/372 (52%)
AT3G23310NP_188973.2 STKc_NDR_like 118..485 CDD:270750 195/372 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4201
eggNOG 1 0.900 - - E1_KOG0605
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 429 1.000 Inparanoid score I419
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 1 1.000 - - FOG0000273
OrthoInspector 1 1.000 - - otm2526
orthoMCL 1 0.900 - - OOG6_100850
Panther 1 1.100 - - O PTHR24356
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X595
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

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