DRSC/TRiP Functional Genomics Resources

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Protein Alignment trc and AT3G17850

DIOPT Version :10

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_188412.2 Gene:AT3G17850 / 821054 AraportID:AT3G17850 Length:1296 Species:Arabidopsis thaliana


Alignment Length:491 Identity:164/491 - (33%)
Similarity:258/491 - (52%) Gaps:77/491 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LDKATKAKVTLENYYSNLVTQYGERKQRLAKLEAQLKDESLSEAQRQEKRLQHAQKETEYLRLKR 85
            :|:.....:|:|.:.:.:.....|:...:.:|....|.:.||....::     |..|.:.:|..|
plant   808 IDRRKFDALTVETFGTRIEKLIREKYVHMCELMDDEKVDLLSTVIDED-----APLEDDVVRSLR 867

  Fly    86 L-------RLGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAERD 143
            .       |..::|||.:|.|.|||||.|.|.:|:.||.::|:|||:||||:.|..|..:.||||
plant   868 TSPVHPRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERD 932

  Fly   144 VLVEADHQWVVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIH 208
            :|:...:.:||:.:|||....||||:||:|.|||:.:||.....|.|:..:.||:|..||::.:|
plant   933 ILINVRNPFVVRFFYSFTCRDNLYLVMEYLNGGDLYSLLRNLGCLEEDIVRVYIAEVVLALEYLH 997

  Fly   209 KLGFIHRDIKPDNLLLDARGHLKLSDFGLC-TGLKKSHRTDFYRDLSQAKPSDFIGTCAS-LSCS 271
            ..|.:|||:||||||:...||:||:||||. .||..|  ||           |..|...| .|..
plant   998 SEGVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS--TD-----------DLAGPAVSGTSLL 1049

  Fly   272 PMDSKRRAESWKRNRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSD 336
            ..:..|.|.|.::..|....|.||||||:|||:.|.||:|...||||:|:|::|:::|.|||.::
plant  1050 DEEESRLAASEEQLERRKKRSAVGTPDYLAPEILLGTGHGATADWWSVGIILFELIVGIPPFNAE 1114

  Fly   337 NPQDTYRKVMN----WRETLIFPPEIP--ISEEAKETIINFCCE-ADRRLGSQRGLEDLKSVPFF 394
            :||..:..::|    |       |.:|  :|.||.:.|..|..| ..:|||: ||..::|...||
plant  1115 HPQQIFDNILNRKIPW-------PHVPEEMSAEAHDIIDRFLTEDPHQRLGA-RGAAEVKQHIFF 1171

  Fly   395 RGVDWEHI-RERPAAIPVEVRSID----------DTSNFDEFPDVSLEIP--------------S 434
            :.::|:.: |::.|.:|....:||          :||:...||  |.|:|              |
plant  1172 KDINWDTLARQKAAFVPASESAIDTSYFRSRYSWNTSDEQFFP--SGEVPDYSDADSMTNSSGCS 1234

  Fly   435 APIPQGGEIA--------KDWVFINYTYKRFEVRNL 462
            :...:.||..        :..:.::|::..|..:||
plant  1235 SNHHEEGEAEECEGHAEFESGIPVDYSFSNFSFKNL 1270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 MobB_Trc-like 24..88 CDD:439274 11/70 (16%)
STKc_NDR_like 91..455 CDD:270750 148/405 (37%)
AT3G17850NP_188412.2 STKc_MAST_like 888..1176 CDD:270731 127/308 (41%)

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