DRSC/TRiP Functional Genomics Resources

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Protein Alignment trc and AT2G19400

DIOPT Version :9

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_565453.1 Gene:AT2G19400 / 816459 AraportID:AT2G19400 Length:527 Species:Arabidopsis thaliana


Alignment Length:476 Identity:217/476 - (45%)
Similarity:293/476 - (61%) Gaps:56/476 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SDHTLDKATKAKVTLENYYSNLVTQYGERKQRLAKLEAQLKDESLSEAQRQEKRLQHAQKETEYL 81
            |:.||:|...||..:||:|:..:....:||:|...||.::....:||.::.|......:|||||.
plant    29 SNSTLEKVAAAKKYIENHYNRRMRHIQQRKERRWVLEQKIASLDVSEKEQLELLEDLQRKETEYT 93

  Fly    82 RLKRLRLGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAERDVLV 146
            ||.|.||.|:||:.|.:|||||||||||.::|.||::||||.|:|::||.:.||.||||||::|.
plant    94 RLMRNRLCVDDFDLLSIIGRGAFGEVRLCREKKTGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 158

  Fly   147 EADHQWVVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKLG 211
            |.....:||:|||||||..||||||:|.|||:|||||:::||:|...:|||:::.|||:||||..
plant   159 EVASDCIVKLYYSFQDPEYLYLIMEYLSGGDVMTLLMREETLTETVARFYIAQSVLAIESIHKHN 223

  Fly   212 FIHRDIKPDNLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIGTCASLSC----SP 272
            ::||||||||||||..||:||||||||                  ||.|    |.::|.    .|
plant   224 YVHRDIKPDNLLLDKYGHMKLSDFGLC------------------KPLD----CRNISAMNVNEP 266

  Fly   273 MDSK---------------RRAESWKR----------NRRALAYSTVGTPDYIAPEVFLQTGYGP 312
            ::.:               ||...||.          |||.||||||||||||||||.|:.|||.
plant   267 LNDENINESIDGDENCSIGRRGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGV 331

  Fly   313 ACDWWSLGVIMYEMLMGYPPFCSDNPQDTYRKVMNWRETLIFPPEIPISEEAKETIINFCCEADR 377
            .|||||||.||||||:|||||.||:|..|.||:::||..|:||....::.||::.|....|:::.
plant   332 ECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVSWRTHLVFPEGARLTPEARDLICRLLCDSEH 396

  Fly   378 RLGSQ-RGLEDLKSVPFFRGVDWEHIRERPAAIPVEVRSIDDTSNFDEFPDVSLEIP----SAPI 437
            ||||. .|.|.:|:..:|:.|:||.:.|..||....|....||.||.:|.:|....|    |.|.
plant   397 RLGSHGAGAEQIKAHTWFKDVEWEKLYEMDAAFKPVVNGELDTQNFMKFDEVECPKPARTGSGPS 461

  Fly   438 PQGGEIAKDWVFINYTYKRFE 458
            .:.....::..|:.|||:.|:
plant   462 WKVSITPQNINFVGYTYRNFD 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 OmpH 16..>85 CDD:214922 24/67 (36%)
STKc_NDR_like 91..455 CDD:270750 187/397 (47%)
AT2G19400NP_565453.1 STKc_NDR_like 103..479 CDD:270750 187/397 (47%)
S_TKc 105..414 CDD:214567 166/330 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4201
eggNOG 1 0.900 - - E1_KOG0605
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 429 1.000 Inparanoid score I419
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 1 1.000 - - FOG0000273
OrthoInspector 1 1.000 - - otm2526
orthoMCL 1 0.900 - - OOG6_100850
Panther 1 1.100 - - O PTHR24356
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X595
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

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