DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trc and Stk38l

DIOPT Version :10

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_001076805.1 Gene:Stk38l / 691337 RGDID:1564793 Length:464 Species:Rattus norvegicus


Alignment Length:452 Identity:316/452 - (69%)
Similarity:384/452 - (84%) Gaps:14/452 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GASIRF--SDHTLDKATKAKVTLENYYSNLVTQYGERKQRLAKLEAQLKDESLSEAQRQEKRLQH 73
            ||:..|  |.||.::.|.||:||||:||||:.|:.||:.|..|||..:::|.|::.:::.:|.||
  Rat     6 GATTTFPMSSHTRERVTVAKLTLENFYSNLILQHEERETRQKKLEVAMEEEGLADEEKKLRRSQH 70

  Fly    74 AQKETEYLRLKRLRLGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHV 138
            |:||||:|||||.|||::|||:||||||||||||||||||||||:||||:||||||||||||||:
  Rat    71 ARKETEFLRLKRTRLGLDDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHI 135

  Fly   139 RAERDVLVEADHQWVVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALA 203
            |||||:|||||..|||||:|||||..||||||||||||||||||||||||:||.||||||||.||
  Rat   136 RAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYISETVLA 200

  Fly   204 IDSIHKLGFIHRDIKPDNLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIGTCASL 268
            ||:||:|||||||||||||||||:||:|||||||||||||:|||:|||:|:...||||       
  Rat   201 IDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDF------- 258

  Fly   269 SCSPMDSKRRAESWKRNRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPF 333
            |...|:|||:||:||:|||.|||||||||||||||||:||||...||||||||||||||:|:|||
  Rat   259 SFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGFPPF 323

  Fly   334 CSDNPQDTYRKVMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLKSVPFFRGVD 398
            ||:.||:||||||:|:|||.||||:|:||:||:.|:.||.:::.|:|: .|:|::|..|||.|||
  Rat   324 CSETPQETYRKVMSWKETLAFPPEVPVSEKAKDLILRFCTDSENRIGN-GGVEEIKGHPFFEGVD 387

  Fly   399 WEHIRERPAAIPVEVRSIDDTSNFDEFP--DVSLEIPSAPIPQGGEIAKDWVFINYTYKRFE 458
            |.||||||||||:|:||||||||||:||  |:...:|:...|.  ..:|||||:||||||||
  Rat   388 WGHIRERPAAIPIEIRSIDDTSNFDDFPESDILQPVPNTTEPD--YKSKDWVFLNYTYKRFE 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 MobB_Trc-like 24..88 CDD:439274 33/63 (52%)
STKc_NDR_like 91..455 CDD:270750 269/365 (74%)
Stk38lNP_001076805.1 MobB_NDR_LATS-like 12..86 CDD:459252 37/73 (51%)
STKc_NDR2 87..452 CDD:270776 274/371 (74%)

Return to query results.
Submit another query.