DRSC/TRiP Functional Genomics Resources

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Protein Alignment trc and Pkc53E

DIOPT Version :9

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_725626.1 Gene:Pkc53E / 48311 FlyBaseID:FBgn0003091 Length:679 Species:Drosophila melanogaster


Alignment Length:406 Identity:119/406 - (29%)
Similarity:202/406 - (49%) Gaps:69/406 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 NYYSNLVTQ---------YGERKQRLAKLEAQLKDESLSEAQRQEKRLQHAQKETEYLRLKRLRL 88
            |.:..|:||         ..:.:|.|.||:         :...|:|.:........:...|:..:
  Fly   290 NGWFKLLTQDEGEYYNVPCADDEQDLLKLK---------QKPSQKKPMVMRSDTNTHTSSKKDMI 345

  Fly    89 GVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAERDVLVEADH-QW 152
            ...||..:||:|:|:||:|.|.::|.:..:||:|:|:|..:::.:.|.....|:.||...:. .:
  Fly   346 RATDFNFIKVLGKGSFGKVLLAERKGSEELYAIKILKKDVIIQDDDVECTMIEKRVLALGEKPPF 410

  Fly   153 VVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKLGFIHRDI 217
            :|:::..||....|:.:||::.|||:|..:.:.....|....||.:|.|..:..:|..|.::||:
  Fly   411 LVQLHSCFQTMDRLFFVMEYVNGGDLMFQIQQFGKFKEPVAVFYAAEIAAGLFFLHTKGILYRDL 475

  Fly   218 KPDNLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIGTCASLSCSPMDSKRRAESW 282
            |.||:||||.||:|::|||:|                   ..:.:|          |...:    
  Fly   476 KLDNVLLDADGHVKIADFGMC-------------------KENIVG----------DKTTK---- 507

  Fly   283 KRNRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDNPQDTYRKVMN 347
                     :..|||||||||:.|...||.:.|||:.||::||||:|.|||..::.::.:..:.:
  Fly   508 ---------TFCGTPDYIAPEIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD 563

  Fly   348 WRETLIFPPEIPISEEAKETIINFCC-EADRRLG-SQRGLEDLKSVPFFRGVDWEHIRERPAAIP 410
              ..:.:|..  :|:||||....|.. :.::||| ...|.||::..||||.:|||.|..|....|
  Fly   564 --HNVSYPKS--LSKEAKEACKGFLTKQPNKRLGCGSSGEEDVRLHPFFRRIDWEKIENREVQPP 624

  Fly   411 V--EVRSIDDTSNFDE 424
            .  :::...|.||||:
  Fly   625 FKPKIKHRKDVSNFDK 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 OmpH 16..>85 CDD:214922 10/60 (17%)
STKc_NDR_like 91..455 CDD:270750 108/339 (32%)
Pkc53ENP_725626.1 C1_cPKC_rpt1 44..110 CDD:410383
C1_cPKC_rpt2 120..173 CDD:410386
C2_PKC_alpha_gamma 177..307 CDD:175992 4/16 (25%)
STKc_cPKC 353..672 CDD:270739 106/334 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24356
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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