DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trc and wts

DIOPT Version :9

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_733403.1 Gene:wts / 43651 FlyBaseID:FBgn0011739 Length:1105 Species:Drosophila melanogaster


Alignment Length:436 Identity:193/436 - (44%)
Similarity:283/436 - (64%) Gaps:8/436 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 KVTLENYYSNLVTQYGERKQRLAKLEAQLKDESLSEAQRQEKRLQHAQKETEYLRLKRLRLGVED 92
            |..:|.:..|::..|.:|..|..:||.::....|.:..:.|.|....|||:.|:||||.::....
  Fly   654 KFFMEQHIENVIKSYRQRTYRKNQLEKEMHKVGLPDQTQIEMRKMLNQKESNYIRLKRAKMDKSM 718

  Fly    93 FEALKVIGRGAFGEVRLVQKKDT-GHVYAMKVLRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 156
            |..||.||.||||||.||.|.|| .|:||||.|||||:|::.|||||:||||:|.|||:.||||:
  Fly   719 FVKLKPIGVGAFGEVTLVSKIDTSNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNNWVVKL 783

  Fly   157 YYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKLGFIHRDIKPDN 221
            ||||||..|||.:|:::||||:|:||:|.....||..:|||:|...|:||:||:|||||||||||
  Fly   784 YYSFQDKDNLYFVMDYIPGGDLMSLLIKLGIFEEELARFYIAEVTCAVDSVHKMGFIHRDIKPDN 848

  Fly   222 LLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIGTCASLS-CSPMDSKRRAESWKRN 285
            :|:|..||:||:|||||||.:.:|.:.:|::.......|.:......| ..|..:.......:.:
  Fly   849 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQENGNHSRQDSMEPWEEYSENGPKPTVLERRRMRDH 913

  Fly   286 RRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDNPQDTYRKVMNWRE 350
            :|.||:|.||||:||||||..::||...||:||:|||:||||:|.|||.:::|.:|.:||:||.:
  Fly   914 QRVLAHSLVGTPNYIAPEVLERSGYTQLCDYWSVGVILYEMLVGQPPFLANSPLETQQKVINWEK 978

  Fly   351 TLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLKSVPFFRGVDWEHIRERPAAIPVEVRS 415
            ||..||:..:|.||.:.|...|..||:|||  :.::::||..||:|:|:..:|::.|....|::.
  Fly   979 TLHIPPQAELSREATDLIRRLCASADKRLG--KSVDEVKSHDFFKGIDFADMRKQKAPYIPEIKH 1041

  Fly   416 IDDTSNFDEFPDVSLEIPSAPIPQGGEIAKD----WVFINYTYKRF 457
            ..||||||......|....:.:..|.::.::    ..|..:|::||
  Fly  1042 PTDTSNFDPVDPEKLRSNDSTMSSGDDVDQNDRTFHGFFEFTFRRF 1087

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 OmpH 16..>85 CDD:214922 17/56 (30%)
STKc_NDR_like 91..455 CDD:270750 172/369 (47%)
wtsNP_733403.1 STKc_LATS 717..1078 CDD:270749 170/362 (47%)
S_TKc 719..1020 CDD:214567 155/302 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D21674at7147
OrthoFinder 1 1.000 - - FOG0000273
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24356
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
44.020

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