DRSC/TRiP Functional Genomics Resources

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Protein Alignment trc and stk38a

DIOPT Version :9

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_998621.1 Gene:stk38a / 406765 ZFINID:ZDB-GENE-040426-2811 Length:468 Species:Danio rerio


Alignment Length:462 Identity:322/462 - (69%)
Similarity:387/462 - (83%) Gaps:18/462 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MSSRTQDADGASIRFSDHTLDKATKAKVTLENYYSNLVTQYGERKQRLAKLEAQLKDESLSEAQR 66
            |:|:|..:.     .|:||.::.|.|||||||:||||::|:.||:.|..|||..:..|.|::.::
Zfish     3 MTSQTTCSS-----MSNHTKERVTMAKVTLENFYSNLISQHEEREMRQQKLEKVMDQEGLADEEK 62

  Fly    67 QEKRLQHAQKETEYLRLKRLRLGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLE 131
            :.:|.:||:||||:|||||.|||:||||:|||||||||||||||||||||||||||:||||||||
Zfish    63 RLRRSEHARKETEFLRLKRTRLGLEDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLE 127

  Fly   132 KEQVAHVRAERDVLVEADHQWVVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFY 196
            ||||.|:|||||:|||||..|||||:|||||.:||||||||||||||||||||||||:||.||||
Zfish   128 KEQVGHIRAERDILVEADSLWVVKMFYSFQDKMNLYLIMEFLPGGDMMTLLMKKDTLTEEATQFY 192

  Fly   197 ISETALAIDSIHKLGFIHRDIKPDNLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF 261
            |:||.|||||||:||||||||||||||||:|||:|||||||||||||:|||:|||:|:.:.||||
Zfish   193 IAETVLAIDSIHQLGFIHRDIKPDNLLLDSRGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDF 257

  Fly   262 IGTCASLSCSPMDSKRRAESWKRNRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEM 326
                   :...|:|||:||:||||||.||:||||||||||||||:|.||...|||||||||||||
Zfish   258 -------TFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQNGYNKLCDWWSLGVIMYEM 315

  Fly   327 LMGYPPFCSDNPQDTYRKVMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLKSV 391
            |:|||||||:.||:|||||||||||||||||:||||:||:.|:.||||.:.|:|: .|:|::|:.
Zfish   316 LIGYPPFCSETPQETYRKVMNWRETLIFPPEVPISEKAKDLILRFCCEGEHRIGA-TGVEEIKTN 379

  Fly   392 PFFRGVDWEHIRERPAAIPVEVRSIDDTSNFDEFPDVSLEIPSAPIPQGGEI-----AKDWVFIN 451
            .||.|||::||||||||||:|::|||||||||||||..:..|||........     :|||||||
Zfish   380 AFFEGVDYDHIRERPAAIPIEIKSIDDTSNFDEFPDSDILQPSATTVVSNHTEADLKSKDWVFIN 444

  Fly   452 YTYKRFE 458
            |||||||
Zfish   445 YTYKRFE 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 OmpH 16..>85 CDD:214922 34/68 (50%)
STKc_NDR_like 91..455 CDD:270750 275/368 (75%)
stk38aNP_998621.1 STKc_NDR1 87..464 CDD:270777 280/373 (75%)
S_TKc 89..382 CDD:214567 232/300 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594831
Domainoid 1 1.000 482 1.000 Domainoid score I392
eggNOG 1 0.900 - - E1_KOG0605
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56033
Inparanoid 1 1.050 667 1.000 Inparanoid score I725
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D216969at33208
OrthoFinder 1 1.000 - - FOG0000273
OrthoInspector 1 1.000 - - otm25356
orthoMCL 1 0.900 - - OOG6_100850
Panther 1 1.100 - - LDO PTHR24356
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R870
SonicParanoid 1 1.000 - - X595
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.790

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