DRSC/TRiP Functional Genomics Resources

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Protein Alignment trc and stk38a

DIOPT Version :10

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_998621.1 Gene:stk38a / 406765 ZFINID:ZDB-GENE-040426-2811 Length:468 Species:Danio rerio


Alignment Length:462 Identity:322/462 - (69%)
Similarity:387/462 - (83%) Gaps:18/462 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MSSRTQDADGASIRFSDHTLDKATKAKVTLENYYSNLVTQYGERKQRLAKLEAQLKDESLSEAQR 66
            |:|:|..:.     .|:||.::.|.|||||||:||||::|:.||:.|..|||..:..|.|::.::
Zfish     3 MTSQTTCSS-----MSNHTKERVTMAKVTLENFYSNLISQHEEREMRQQKLEKVMDQEGLADEEK 62

  Fly    67 QEKRLQHAQKETEYLRLKRLRLGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLE 131
            :.:|.:||:||||:|||||.|||:||||:|||||||||||||||||||||||||||:||||||||
Zfish    63 RLRRSEHARKETEFLRLKRTRLGLEDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLE 127

  Fly   132 KEQVAHVRAERDVLVEADHQWVVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFY 196
            ||||.|:|||||:|||||..|||||:|||||.:||||||||||||||||||||||||:||.||||
Zfish   128 KEQVGHIRAERDILVEADSLWVVKMFYSFQDKMNLYLIMEFLPGGDMMTLLMKKDTLTEEATQFY 192

  Fly   197 ISETALAIDSIHKLGFIHRDIKPDNLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF 261
            |:||.|||||||:||||||||||||||||:|||:|||||||||||||:|||:|||:|:.:.||||
Zfish   193 IAETVLAIDSIHQLGFIHRDIKPDNLLLDSRGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDF 257

  Fly   262 IGTCASLSCSPMDSKRRAESWKRNRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEM 326
                   :...|:|||:||:||||||.||:||||||||||||||:|.||...|||||||||||||
Zfish   258 -------TFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQNGYNKLCDWWSLGVIMYEM 315

  Fly   327 LMGYPPFCSDNPQDTYRKVMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLKSV 391
            |:|||||||:.||:|||||||||||||||||:||||:||:.|:.||||.:.|:|: .|:|::|:.
Zfish   316 LIGYPPFCSETPQETYRKVMNWRETLIFPPEVPISEKAKDLILRFCCEGEHRIGA-TGVEEIKTN 379

  Fly   392 PFFRGVDWEHIRERPAAIPVEVRSIDDTSNFDEFPDVSLEIPSAPIPQGGEI-----AKDWVFIN 451
            .||.|||::||||||||||:|::|||||||||||||..:..|||........     :|||||||
Zfish   380 AFFEGVDYDHIRERPAAIPIEIKSIDDTSNFDEFPDSDILQPSATTVVSNHTEADLKSKDWVFIN 444

  Fly   452 YTYKRFE 458
            |||||||
Zfish   445 YTYKRFE 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 MobB_Trc-like 24..88 CDD:439274 33/63 (52%)
STKc_NDR_like 91..455 CDD:270750 275/368 (75%)
stk38aNP_998621.1 MobB_NDR1 11..85 CDD:439276 37/78 (47%)
STKc_NDR1 87..464 CDD:270777 280/373 (75%)

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