DRSC/TRiP Functional Genomics Resources

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Protein Alignment trc and CG32944

DIOPT Version :9

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_788574.3 Gene:CG32944 / 40560 FlyBaseID:FBgn0052944 Length:576 Species:Drosophila melanogaster


Alignment Length:412 Identity:116/412 - (28%)
Similarity:183/412 - (44%) Gaps:99/412 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 LGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAERDVLVEADHQW 152
            :..:.|:.|:.||:|:||:|.:|||:|||.:||||.:.::....:..:..|..|.::|...:|.:
  Fly   146 INFDHFQILRAIGKGSFGKVCIVQKRDTGILYAMKYVSRSACEMRGALGGVIKEVELLSSLEHPF 210

  Fly   153 VVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKLGFIHRDI 217
            :|.:::||||..:|:::.:.|.|||:...|..:...||:.....:.|...|::.:.....:||||
  Fly   211 LVNLWFSFQDEEDLFMVCDLLTGGDLRYHLQNRVEFSEQSVALLVCELGSALEYLQANRVVHRDI 275

  Fly   218 KPDNLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIGTCASLSCSPMDSKRRAESW 282
            ||||:|||..||..|:||.:.|.|:|:                                      
  Fly   276 KPDNILLDDAGHAHLTDFNIATRLQKN-------------------------------------- 302

  Fly   283 KRNRRALAYSTVGTPDYIAPEVFL-----QTGYGPACDWWSLGVIMYEMLMGYPPFC--SDNPQD 340
                 |||.|..||..|:||||||     ..||....|||||||:.|||.....||.  |:.|..
  Fly   303 -----ALACSMSGTKPYMAPEVFLCALDEVAGYSYPVDWWSLGVVAYEMRGNIRPFVVHSNTPLA 362

  Fly   341 TYRKVMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGL-----EDLKSVPFFRGVDWE 400
            ..:.::|   |.:..|....|        ||.....|.|.:..|.     ::|...|..|.:|::
  Fly   363 EIKNILN---TPVHYPRYWSS--------NFVDLLQRLLSTYPGARISTRQELHQTPMLRNIDFQ 416

  Fly   401 HIRE---RPAAIPVEVRSIDDTSNFDEFPDVSLE---IPSAPI------------------PQGG 441
            .:.|   :|...|.|     |..|.|  |.:.||   :.|.|:                  |:..
  Fly   417 RVLEKKIKPIYKPPE-----DHLNCD--PCLELEEMIVESRPLHKKKKRLAKQRSAQRDSDPETA 474

  Fly   442 EIAKDWVFINYTYKRFEVRNLE 463
             :.|:::..| .||..:.:.:|
  Fly   475 -LVKEFIVYN-RYKELKRKAME 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 OmpH 16..>85 CDD:214922
STKc_NDR_like 91..455 CDD:270750 113/399 (28%)
CG32944NP_788574.3 STKc_Yank1 150..410 CDD:270730 96/313 (31%)
S_TKc 151..405 CDD:214567 94/307 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24356
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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