DRSC/TRiP Functional Genomics Resources

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Protein Alignment trc and dop

DIOPT Version :10

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_648778.1 Gene:dop / 39686 FlyBaseID:FBgn0267390 Length:2139 Species:Drosophila melanogaster


Alignment Length:337 Identity:127/337 - (37%)
Similarity:187/337 - (55%) Gaps:36/337 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 DFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 156
            ||:.:|:|..||:|.|.||:.|.|...:|||.:.|.:::.:.||..|.||||:|..||:.:||.|
  Fly   834 DFDIVKLISNGAYGAVYLVKHKTTRQRFAMKKINKNNLILRNQVEQVFAERDILSFADNPFVVSM 898

  Fly   157 YYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKLGFIHRDIKPDN 221
            |.||:...:|.|:||::.|||..|||.....|..:..:||.:||.||::.:|..|.:|||:||||
  Fly   899 YCSFETKKHLCLVMEYVEGGDCGTLLKNIGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDN 963

  Fly   222 LLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIGTCASLSCSPMDSKRRAESWKRNR 286
            ||:.|.||:||:||||......|..|:.|...                   :||:.|..|.|:  
  Fly   964 LLITALGHIKLTDFGLSKMGLMSLATNLYEGY-------------------IDSETRQFSDKQ-- 1007

  Fly   287 RALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDNPQDTYRKVMN---- 347
                  ..|||:||||||.|:.|||...||||:|:|:||.|:|..||..:..::.:...:|    
  Fly  1008 ------VYGTPEYIAPEVILRQGYGKPVDWWSMGIILYEFLIGCVPFFGETTEELFAHTVNDDIE 1066

  Fly   348 WRETLIFPPEIPISEEAKETIINFCCEADR-RLGSQRGLEDLKSVPFFRGVDWEHIRERPAAIPV 411
            |.::    .:.|:..|||:.|.....:..| |||:|.|..::|...:|.|:||..:..:.|....
  Fly  1067 WPDS----EDWPVQAEAKDIISQLLQQNPRDRLGTQSGALEMKEHEYFLGMDWNSLLRQKAEFVP 1127

  Fly   412 EVRSIDDTSNFD 423
            ::...||||.||
  Fly  1128 QLSHDDDTSYFD 1139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 MobB_Trc-like 24..88 CDD:439274
STKc_NDR_like 91..455 CDD:270750 127/337 (38%)
dopNP_648778.1 DUF1908 344..702 CDD:462637
STKc_MAST 834..1115 CDD:270760 118/311 (38%)
PDZ_MAST 1502..1594 CDD:467189
Blue background indicates that the domain is not in the aligned region.

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