DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trc and inaC

DIOPT Version :9

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster


Alignment Length:376 Identity:114/376 - (30%)
Similarity:185/376 - (49%) Gaps:52/376 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 AQLKDESLSEAQRQEKRLQHAQKETEYLRLKRLRLGVEDFEALKVIGRGAFGEVRLVQKKDTGHV 118
            |:|:||...:.:..||| :...|:..:...||..:...||..:||||:|:||:|.|.:::.|..:
  Fly   333 ARLRDEVRHDRRPNEKR-RMDNKDMPHNMSKRDMIRAADFNFVKVIGKGSFGKVLLAERRGTDEL 396

  Fly   119 YAMKVLRKADMLEKEQVAHVRAERDVL-VEADHQWVVKMYYSFQDPVNLYLIMEFLPGGDMMTLL 182
            ||:|||||..:::.:.:.....|:.:| :.....::|.|:..||....|:.:||:..|||:|..:
  Fly   397 YAVKVLRKDVIIQTDDMELPMNEKKILALSGRPPFLVSMHSCFQTMDRLFFVMEYCKGGDLMYHM 461

  Fly   183 MKKDTLSEEGTQFYISETALAIDSIHKLGFIHRDIKPDNLLLDARGHLKLSDFGLCTGLKKSHRT 247
            .:.....|....||..|.|:|:..:|:...|:||:|.||:|||..||:||.||||          
  Fly   462 QQYGRFKESVAIFYAVEVAIALFFLHERDIIYRDLKLDNILLDGEGHVKLVDFGL---------- 516

  Fly   248 DFYRDLSQAKPSDFIGTCASLSCSPMDSKRRAESWKRNRRALAYSTVGTPDYIAPEVFLQTGYGP 312
                                       ||...     ..|....:..|||:|:|||:.....|..
  Fly   517 ---------------------------SKEGV-----TERQTTRTFCGTPNYMAPEIVSYDPYSI 549

  Fly   313 ACDWWSLGVIMYEMLMGYPPFCSDNPQDTYRKVMNWRETLIFPPEIPISEEAKETIINFCC-EAD 376
            |.||||.||:::|.:.|..||..|:....:|.:.:  :..:||..  .|.||.:.|.:|.. :.:
  Fly   550 AADWWSFGVLLFEFMAGQAPFEGDDETTVFRNIKD--KKAVFPKH--FSVEAMDIITSFLTKKPN 610

  Fly   377 RRLGSQR-GLEDLKSVPFFRGVDWEHIRERPAAIPVE--VRSIDDTSNFDE 424
            .|||:.| ..:::.:.||||.|||:.........|::  ::...|.||||:
  Fly   611 NRLGAGRYARQEITTHPFFRNVDWDKAEACEMEPPIKPMIKHRKDISNFDD 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 OmpH 16..>85 CDD:214922 8/30 (27%)
STKc_NDR_like 91..455 CDD:270750 104/339 (31%)
inaCNP_476863.1 C1_1 72..124 CDD:278556
C1_1 137..189 CDD:278556
C2_PKC_alpha_gamma 194..324 CDD:175992
S_TKc 371..629 CDD:214567 91/303 (30%)
STKc_PKC 375..692 CDD:270722 102/333 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24356
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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