DRSC/TRiP Functional Genomics Resources

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Protein Alignment trc and Pkn

DIOPT Version :9

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_001097237.1 Gene:Pkn / 35950 FlyBaseID:FBgn0020621 Length:1501 Species:Drosophila melanogaster


Alignment Length:418 Identity:123/418 - (29%)
Similarity:208/418 - (49%) Gaps:73/418 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 SLSEAQRQEKRLQHAQ----KETEYLRLKRL--------RLGVEDFEALKVIGRGAFGEVRLVQK 112
            |.|..|:|::|...|:    :|:..|...|.        .|.:::|..|.|:|||.||:|.|.|.
  Fly  1129 SNSNQQQQQQRRNVARGLQYRESGGLETGRAGKQPPNAGMLSMDNFRLLSVLGRGHFGKVILSQL 1193

  Fly   113 KDTGHVYAMKVLRKADMLEKEQVAHVRAERDVLVEAD---HQWVVKMYYSFQDPVNLYLIMEFLP 174
            :.....||:|.|:|.|::.:::|..:.:|:.:...|:   |.::|.:|..||...::..:||:..
  Fly  1194 RSNNQYYAIKALKKGDIIARDEVESLLSEKRIFEVANAMRHPFLVNLYSCFQTEQHVCFVMEYAA 1258

  Fly   175 GGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKLGFIHRDIKPDNLLLDARGHLKLSDFGLC- 238
            |||:| :.:..|...|....||.:...|.:..:|:...|:||:|.||||||..|::|::||||| 
  Fly  1259 GGDLM-MHIHTDVFLEPRAVFYAACVVLGLQYLHENKIIYRDLKLDNLLLDTEGYVKIADFGLCK 1322

  Fly   239 TGLKKSHRTDFYRDLSQAKPSDFIGT-CASLSCSPMDSKRRAESWKRNRRALAYSTVGTPDYIAP 302
            .|:....||               || |                             |||:::||
  Fly  1323 EGMGFGDRT---------------GTFC-----------------------------GTPEFLAP 1343

  Fly   303 EVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDNPQDTYRKVMNWRETLIFPPEIPISEEAKET 367
            ||..:|.|..|.|||.|||:::|||:|..||..|:.::.:..::|  :.:.:|..  :|.||...
  Fly  1344 EVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVN--DEVRYPRF--LSLEAIAV 1404

  Fly   368 IINFCCE-ADRRLG-SQRGLEDLKSVPFFRGVDWEHI---RERPAAIPVEVRSIDDTSNFD-EFP 426
            :.....: .:|||| |:|..||:|...|||.:.|:.:   :.:|..:|. :..::|.|||| ||.
  Fly  1405 MRRLLRKNPERRLGSSERDAEDVKKQAFFRSIVWDDLLLRKVKPPFVPT-INHLEDVSNFDEEFT 1468

  Fly   427 DVSLEIPSAPIPQGGEIAKDWVFINYTY 454
            ....::.....|:.....:..:|.:::|
  Fly  1469 SEKAQLTPPKEPRHLTEEEQLLFQDFSY 1496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 OmpH 16..>85 CDD:214922 8/28 (29%)
STKc_NDR_like 91..455 CDD:270750 113/375 (30%)
PknNP_001097237.1 HR1_PKN_1 131..194 CDD:212012
HR1_PKN_2 243..309 CDD:212013
HR1_PKN_3 340..414 CDD:212015
C2 530..611 CDD:301316
STKc_PKN 1174..1499 CDD:270741 113/373 (30%)
S_TKc 1174..1433 CDD:214567 97/307 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24356
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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