DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trc and LATS2

DIOPT Version :9

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_055387.2 Gene:LATS2 / 26524 HGNCID:6515 Length:1088 Species:Homo sapiens


Alignment Length:449 Identity:198/449 - (44%)
Similarity:281/449 - (62%) Gaps:25/449 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 KVTLENYYSNLVTQYGERKQRLAKLEAQLKDESLSEAQRQEKRLQHAQKETEYLRLKRLRLGVED 92
            |..:|.:..|::..|.::..|..:||.::....|.||::::.|....|||:.|.||||.::....
Human   603 KFFMEQHVENVIKTYQQKVNRRLQLEQEMAKAGLCEAEQEQMRKILYQKESNYNRLKRAKMDKSM 667

  Fly    93 FEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 157
            |..:|.:|.||||||.|..|.||..:||||.|||.|:|.:.|||||:||||:|.|||::||||:|
Human   668 FVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLY 732

  Fly   158 YSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKLGFIHRDIKPDNL 222
            |||||..:||.:|:::||||||:||::.:...|...:|||:|..|||:|:||:|||||||||||:
Human   733 YSFQDKDSLYFVMDYIPGGDMMSLLIRMEVFPEHLARFYIAELTLAIESVHKMGFIHRDIKPDNI 797

  Fly   223 LLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAK-----PSDFIGTCASLSCSPMDSKRRAESW 282
            |:|..||:||:|||||||.:.:|.:.:|:..|..:     |||.....::..|..........:.
Human   798 LIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHVRQDSMEPSDLWDDVSNCRCGDRLKTLEQRAR 862

  Fly   283 KRNRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDNPQDTYRKVMN 347
            |:::|.||:|.||||:||||||.|:.||...|||||:|||::|||:|.|||.:..|.:|..||:|
Human   863 KQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVIN 927

  Fly   348 WRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLKSVPFFRGVDW-EHIRERPAAIPV 411
            |..||..|.::.:|.||::.|...||.||.||| :.|.:|||:.|||..:|: ..||::||....
Human   928 WENTLHIPAQVKLSPEARDLITKLCCSADHRLG-RNGADDLKAHPFFSAIDFSSDIRKQPAPYVP 991

  Fly   412 EVRSIDDTSNFDEFPDVSLEIPSAPIPQGGEIAKDW-------------VFINYTYKRF 457
            .:....||||||   .|..|.|.....:|.  .|.|             .|..:|::||
Human   992 TISHPMDTSNFD---PVDEESPWNDASEGS--TKAWDTLTSPNNKHPEHAFYEFTFRRF 1045

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 OmpH 16..>85 CDD:214922 17/56 (30%)
STKc_NDR_like 91..455 CDD:270750 177/382 (46%)
LATS2NP_055387.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..49
UBA_LATS2 101..141 CDD:270581
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 271..323
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 383..428
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 454..483
PPxY motif 515..518
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 543..592
STKc_LATS2 666..1046 CDD:173715 179/386 (46%)
S_TKc 668..973 CDD:214567 156/305 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 994..1022 11/32 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1056..1088
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 1 1.000 - - FOG0000273
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.920

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