DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trc and orb6

DIOPT Version :9

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_593165.1 Gene:orb6 / 2543441 PomBaseID:SPAC821.12 Length:469 Species:Schizosaccharomyces pombe


Alignment Length:454 Identity:224/454 - (49%)
Similarity:303/454 - (66%) Gaps:21/454 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 FSDHTLDKATKAKVTLENYYSNLVTQYGERKQRLAKLEAQLKDESLSEAQRQEKRLQHAQKETEY 80
            |...||||..|.|..:|:||...|....||.||...||.:|..|..||.::..:.....:||:::
pombe    16 FPKSTLDKVQKTKKYIEHYYKVAVDHAVERNQRRINLEQRLATERGSEERKNRQLRASGEKESQF 80

  Fly    81 LRLKRLRLGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAERDVL 145
            ||.:|.||.:|||..:||||:|||||||||||.|||.:||||.|.|.:|.:::|:|||:||||:|
pombe    81 LRFRRTRLSLEDFSTIKVIGKGAFGEVRLVQKLDTGKIYAMKSLLKTEMFKRDQLAHVKAERDLL 145

  Fly   146 VEADHQWVVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKL 210
            ||:|..|||.:||:|||.:.||||||||||||:||:|:..||.||:.|:||::|..|||..:|::
pombe   146 VESDSPWVVSLYYAFQDSLYLYLIMEFLPGGDLMTMLINYDTFSEDVTRFYMAECVLAIADVHRM 210

  Fly   211 GFIHRDIKPDNLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFI--GTCASLSCSPM 273
            |:|||||||||:|:|..||:|||||||.||..|..::..|   .:.:..:.:  |.........|
pombe   211 GYIHRDIKPDNILIDRDGHIKLSDFGLSTGFYKQDQSASY---MKPRTGNTVKRGQMVDAIWLTM 272

  Fly   274 DSKRRAESWKRNRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDNP 338
            .||.:..:||:|||.:||||||||||||||:|||.|||..|||||||.||:|.|:|:|||||:|.
pombe   273 SSKDKMATWKKNRRVMAYSTVGTPDYIAPEIFLQQGYGQDCDWWSLGAIMFECLIGWPPFCSENS 337

  Fly   339 QDTYRKVMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLKSVPFFRGVDWEHIR 403
            .:||||::||||||.||.:|.:|.||::.:.....:::.||| :.|..::...|||.|:||:|||
pombe   338 HETYRKIINWRETLTFPNDIHLSIEARDLMDRLMTDSEHRLG-RGGAIEIMQHPFFTGIDWDHIR 401

  Fly   404 ERPAAIPVEVRSIDDTSNF--DEFPDVSLEIPSAPI--------PQGGEIAKDWVFINYTYKRF 457
            |..|.....::||.||..|  ||..    ::|..|:        ||..| ..:..|:.||||:|
pombe   402 ETAAPFIPNLKSITDTHYFPVDELE----QVPEQPVTQQPASVDPQTLE-QTNLAFLGYTYKKF 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 OmpH 16..>85 CDD:214922 25/68 (37%)
STKc_NDR_like 91..455 CDD:270750 193/375 (51%)
orb6NP_593165.1 STKc_NDR_like_fungal 91..461 CDD:270778 196/379 (52%)
S_TKc 93..392 CDD:214567 166/302 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 341 1.000 Domainoid score I189
eggNOG 1 0.900 - - E1_KOG0605
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 438 1.000 Inparanoid score I312
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000273
OrthoInspector 1 1.000 - - oto100422
orthoMCL 1 0.900 - - OOG6_100850
Panther 1 1.100 - - LDO PTHR24356
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R870
SonicParanoid 1 1.000 - - X595
TreeFam 1 0.960 - -
1211.850

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