DRSC/TRiP Functional Genomics Resources

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Protein Alignment trc and orb6

DIOPT Version :10

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_593165.1 Gene:orb6 / 2543441 PomBaseID:SPAC821.12 Length:469 Species:Schizosaccharomyces pombe


Alignment Length:455 Identity:226/455 - (49%)
Similarity:302/455 - (66%) Gaps:23/455 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 FSDHTLDKATKAKVTLENYYSNLVTQYGERKQRLAKLEAQLKDESLSEAQRQEKRLQHAQKETEY 80
            |...||||..|.|..:|:||...|....||.||...||.:|..|..||.::..:.....:||:::
pombe    16 FPKSTLDKVQKTKKYIEHYYKVAVDHAVERNQRRINLEQRLATERGSEERKNRQLRASGEKESQF 80

  Fly    81 LRLKRLRLGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAERDVL 145
            ||.:|.||.:|||..:||||:|||||||||||.|||.:||||.|.|.:|.:::|:|||:||||:|
pombe    81 LRFRRTRLSLEDFSTIKVIGKGAFGEVRLVQKLDTGKIYAMKSLLKTEMFKRDQLAHVKAERDLL 145

  Fly   146 VEADHQWVVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKL 210
            ||:|..|||.:||:|||.:.||||||||||||:||:|:..||.||:.|:||::|..|||..:|::
pombe   146 VESDSPWVVSLYYAFQDSLYLYLIMEFLPGGDLMTMLINYDTFSEDVTRFYMAECVLAIADVHRM 210

  Fly   211 GFIHRDIKPDNLLLDARGHLKLSDFGLCTGLKKSHRTDFY---RDLSQAKPSDFIGTCASLSCSP 272
            |:|||||||||:|:|..||:|||||||.||..|..::..|   |..:..|.    |.........
pombe   211 GYIHRDIKPDNILIDRDGHIKLSDFGLSTGFYKQDQSASYMKPRTGNTVKR----GQMVDAIWLT 271

  Fly   273 MDSKRRAESWKRNRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDN 337
            |.||.:..:||:|||.:||||||||||||||:|||.|||..|||||||.||:|.|:|:|||||:|
pombe   272 MSSKDKMATWKKNRRVMAYSTVGTPDYIAPEIFLQQGYGQDCDWWSLGAIMFECLIGWPPFCSEN 336

  Fly   338 PQDTYRKVMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLKSVPFFRGVDWEHI 402
            ..:||||::||||||.||.:|.:|.||::.:.....:::.||| :.|..::...|||.|:||:||
pombe   337 SHETYRKIINWRETLTFPNDIHLSIEARDLMDRLMTDSEHRLG-RGGAIEIMQHPFFTGIDWDHI 400

  Fly   403 RERPAAIPVEVRSIDDTSNF--DEFPDVSLEIPSAPI--------PQGGEIAKDWVFINYTYKRF 457
            ||..|.....::||.||..|  ||..    ::|..|:        ||..| ..:..|:.||||:|
pombe   401 RETAAPFIPNLKSITDTHYFPVDELE----QVPEQPVTQQPASVDPQTLE-QTNLAFLGYTYKKF 460

  Fly   458  457
            pombe   461  460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 MobB_Trc-like 24..88 CDD:439274 21/63 (33%)
STKc_NDR_like 91..455 CDD:270750 195/376 (52%)
orb6NP_593165.1 MobB_CBK1 10..89 CDD:439268 27/72 (38%)
STKc_NDR_like_fungal 91..461 CDD:270778 198/380 (52%)

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