DRSC/TRiP Functional Genomics Resources

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Protein Alignment trc and sax-1

DIOPT Version :9

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_508627.5 Gene:sax-1 / 180655 WormBaseID:WBGene00004727 Length:476 Species:Caenorhabditis elegans


Alignment Length:449 Identity:296/449 - (65%)
Similarity:353/449 - (78%) Gaps:14/449 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IRFSDHTLDKATKAKVTLENYYSNLVTQYGERKQRLAKLEAQLKDESLSEAQRQEKRLQHAQKET 78
            :..|.:|.|||:..::::|:|||..|||..||:.||.|||..:....||:.:::|||..|..|||
 Worm     8 MEISQYTKDKASCTRISIESYYSKRVTQCAERENRLKKLEEDISARGLSDEEKEEKRKIHHSKET 72

  Fly    79 EYLRLKRLRLGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAERD 143
            :||||||.||.|.|||:|||||||||||||||||.||||:||||:|||::|:||||.||||||||
 Worm    73 DYLRLKRTRLTVNDFESLKVIGRGAFGEVRLVQKHDTGHIYAMKILRKSEMVEKEQTAHVRAERD 137

  Fly   144 VLVEADHQWVVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIH 208
            :|.|||..|||||||||||..||||:|||||||||||||:|||||:||.|||||:|.||||..||
 Worm   138 ILSEADCDWVVKMYYSFQDYSNLYLVMEFLPGGDMMTLLIKKDTLTEEATQFYIAEAALAIQFIH 202

  Fly   209 KLGFIHRDIKPDNLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIGTCASLSCSPM 273
            .||||||||||||||||||||:|||||||||||||.||||.||:.....|.|||.       .|.
 Worm   203 SLGFIHRDIKPDNLLLDARGHVKLSDFGLCTGLKKFHRTDHYRNWPSTLPPDFIS-------KPF 260

  Fly   274 DSKRRAESWKRNRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDNP 338
            :|||:||:|||||||.||||||||||||||||...||..:||||||||||||||:|||||||:.|
 Worm   261 ESKRKAETWKRNRRAYAYSTVGTPDYIAPEVFQPNGYTKSCDWWSLGVIMYEMLIGYPPFCSELP 325

  Fly   339 QDTYRKVMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLKSVPFFRGVDWEHIR 403
            |:|||||:||::||:||.::|||.|||.||..|||||:||||:..||:::|..||.:.:||.|||
 Worm   326 QETYRKVINWQQTLVFPSDVPISIEAKATIKRFCCEAERRLGNHGGLDEIKQCPFVKRIDWNHIR 390

  Fly   404 ERPAAIPVEVRSIDDTSNFDEFPDVSLEIPSA----PIPQGGEIAKDWVFINYTYKRFE 458
            |||..|.|.|:|||||||||:|||..|..|::    |..|.|...:   |:::|||||:
 Worm   391 ERPPPIRVTVKSIDDTSNFDDFPDEDLTWPTSTLIRPEEQPGRRGE---FVDFTYKRFD 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 OmpH 16..>85 CDD:214922 32/68 (47%)
STKc_NDR_like 91..455 CDD:270750 255/367 (69%)
sax-1NP_508627.5 STKc_NDR_like 85..443 CDD:270750 255/367 (69%)
S_TKc 87..381 CDD:214567 223/300 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166393
Domainoid 1 1.000 449 1.000 Domainoid score I267
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 607 1.000 Inparanoid score I500
Isobase 1 0.950 - 0 Normalized mean entropy S373
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D216969at33208
OrthoFinder 1 1.000 - - FOG0000273
OrthoInspector 1 1.000 - - oto20809
orthoMCL 1 0.900 - - OOG6_100850
Panther 1 1.100 - - LDO PTHR24356
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R870
SonicParanoid 1 1.000 - - X595
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.880

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