DRSC/TRiP Functional Genomics Resources

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Protein Alignment trc and mrck-1

DIOPT Version :9

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_504599.2 Gene:mrck-1 / 179013 WormBaseID:WBGene00006437 Length:1592 Species:Caenorhabditis elegans


Alignment Length:425 Identity:178/425 - (41%)
Similarity:240/425 - (56%) Gaps:75/425 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 DKATKAKVTLENYYSNLVTQYGERKQRLAKLEAQ-----------LKDESLSEAQRQEKRLQH-- 73
            |.|.....||||.|.:     |..|    |.||.           |.||..:...|:||.:..  
 Worm     8 DSAPVRLKTLENIYMD-----GPSK----KPEALSFETLIDSLICLYDECCNSTLRKEKCIAEFV 63

  Fly    74 AQKETEYLRLKRLRLGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHV 138
            ...:|...:.|:|||..:|||.|||||:||||||.:|:.:..|.:||||:|.|.:|:::.:.|..
 Worm    64 ESVKTVISKAKKLRLSRDDFEVLKVIGKGAFGEVAVVRMRGVGEIYAMKILNKWEMVKRAETACF 128

  Fly   139 RAERDVLVEADHQWVVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMK-KDTLSEEGTQFYISETAL 202
            |.||||||..|.:|:..::|:|||..|||.:|::..||||:|||.| .|.:.|...:|||:|..|
 Worm   129 REERDVLVYGDRRWITNLHYAFQDEKNLYFVMDYYIGGDMLTLLSKFVDHIPESMAKFYIAEMVL 193

  Fly   203 AIDSIHKLGFIHRDIKPDNLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIGTCAS 267
            ||||:|:||::|||:||||:|||.:||::|:|||.|           .|.|:.       |:.||
 Worm   194 AIDSLHRLGYVHRDVKPDNVLLDMQGHIRLADFGSC-----------LRILAD-------GSVAS 240

  Fly   268 LSCSPMDSKRRAESWKRNRRALAYSTVGTPDYIAPEVF--LQTG---YGPACDWWSLGVIMYEML 327
                                   ...|||||||:||:.  ::.|   ||..|||||||:.|||||
 Worm   241 -----------------------NVAVGTPDYISPEILRAMEDGRGRYGKECDWWSLGICMYEML 282

  Fly   328 MGYPPFCSDNPQDTYRKVMNWRETLIFP-PEIP--ISEEAKETIINFCCEADRRLGSQRGLEDLK 389
            .|..||.|:...|||.|:|:.::.|.|| .||.  :|||||:.|....|.:|.|.| :.||.|.:
 Worm   283 YGTTPFYSERLVDTYGKIMSHQDMLDFPDDEIDWVVSEEAKDLIRQLICSSDVRFG-RNGLSDFQ 346

  Fly   390 SVPFFRGVDWEHIRE-RPAAIPVEVRSIDDTSNFD 423
            ..|||.|:||..||: .|..:| ||.|.:||||||
 Worm   347 LHPFFEGIDWNTIRDSNPPYVP-EVSSPEDTSNFD 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 OmpH 16..>85 CDD:214922 19/75 (25%)
STKc_NDR_like 91..455 CDD:270750 155/343 (45%)
mrck-1NP_504599.2 STKc_DMPK_like 81..417 CDD:270748 155/343 (45%)
S_TKc 83..351 CDD:214567 136/309 (44%)
COG1340 494..786 CDD:224259
C1 958..1007 CDD:237996
PH_MRCK 1016..1159 CDD:269949
CNH 1182..1494 CDD:214481
PBD 1544..1582 CDD:197628
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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