DRSC/TRiP Functional Genomics Resources

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Protein Alignment trc and DMPK

DIOPT Version :9

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_001275693.1 Gene:DMPK / 1760 HGNCID:2933 Length:655 Species:Homo sapiens


Alignment Length:416 Identity:161/416 - (38%)
Similarity:230/416 - (55%) Gaps:65/416 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 QEKRLQHAQKETEYLRLKRLRLGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLE 131
            ||.....::.|...:|||.:||..:|||.|||||||||.||.:|:.|.||.|||||::.|.|||:
Human    71 QEPPASESRAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLK 135

  Fly   132 KEQVAHVRAERDVLVEADHQWVVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMK-KDTLSEEGTQF 195
            :.:|:..|.||||||..|.:|:.:::::|||...|||:||:..|||::|||.| .:.:..|..:|
Human   136 RGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARF 200

  Fly   196 YISETALAIDSIHKLGFIHRDIKPDNLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSD 260
            |::|..:||||:|:||::||||||||:|||..||::|:|||.|..|    |.|            
Human   201 YLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKL----RAD------------ 249

  Fly   261 FIGTCASLSCSPMDSKRRAESWKRNRRALAYSTVGTPDYIAPEVFLQTG-------YGPACDWWS 318
              ||..||                       ..||||||::||:....|       |||.||||:
Human   250 --GTVRSL-----------------------VAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWA 289

  Fly   319 LGVIMYEMLMGYPPFCSDNPQDTYRKVMNWRETLIFP-PEIPISEEAKETIINFCCEADRRLGSQ 382
            |||..|||..|..||.:|:..:||.|:::::|.|..| .:..:.|||::.|....|..:.||| :
Human   290 LGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCPPETRLG-R 353

  Fly   383 RGLEDLKSVPFFRGVDWEHIRERPAAIPVEVRSIDDTSNFDEFPDVSLEIPSAPIPQGGEIAKD- 446
            .|..|.::.|||.|:||:.:|:.......:.....||.|||...|..    :|.:..|||...| 
Human   354 GGAGDFRTHPFFFGLDWDGLRDSVPPFTPDFEGATDTCNFDLVEDGL----TAMVSGGGETLSDI 414

  Fly   447 ---------WVFINYTYKRFEVRNLE 463
                     ..|:.|:|....:|:.|
Human   415 REGAPLGVHLPFVGYSYSCMALRDSE 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 OmpH 16..>85 CDD:214922 5/17 (29%)
STKc_NDR_like 91..455 CDD:270750 150/382 (39%)
DMPKNP_001275693.1 STKc_DMPK_like 95..432 CDD:270748 150/382 (39%)
S_TKc 97..365 CDD:214567 130/309 (42%)
DMPK_coil 496..556 CDD:117396
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24356
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
33.020

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