DRSC/TRiP Functional Genomics Resources

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Protein Alignment trc and rskra

DIOPT Version :9

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:XP_005157500.1 Gene:rskra / 101883587 ZFINID:ZDB-GENE-130103-8 Length:427 Species:Danio rerio


Alignment Length:366 Identity:100/366 - (27%)
Similarity:162/366 - (44%) Gaps:78/366 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 DFEALKVIGRGAFG---EVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAERDVLVEADHQWV 153
            |.:.|..|.:|:||   :|:.|.|::|   ||:|||.||.:|....:...:.|..:..:..|.::
Zfish    90 DLQILGFIAKGSFGPILKVKDVSKEET---YAVKVLPKAAVLRHGVLQQSKEEVIIQRQVRHPFL 151

  Fly   154 VKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKLGFIHRDIK 218
            :.:...:|...||:::.::...||:.|....|....|...:.:.:|...|:..:|..|.||||:|
Zfish   152 LSLRDCWQSQSNLFIMCDYCSTGDLYTYWTLKGLFEETDVRVFAAELGSALGFLHNFGIIHRDVK 216

  Fly   219 PDNLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIGTCASLSCSPMDSKRRAESWK 283
            .:|:||..:|||:|:||||...|::..|                                     
Zfish   217 MENILLTDKGHLRLTDFGLSRRLERGER------------------------------------- 244

  Fly   284 RNRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDNPQDTYRKVMNW 348
                  |::..||..|:||||.....|..|.||||||:::|.:..|..|..:    :....||..
Zfish   245 ------AFTICGTIQYMAPEVLSGGPYSHAADWWSLGILLYALATGEFPLAA----EVDHAVMLS 299

  Fly   349 R--ETLIFPPEIPISEEAKETIINFCCE-ADRRLGSQRGLEDLKSVPFFRGVDWE-HIRERPAAI 409
            |  |.|...| :.:|......:|...|: ..|||   |.||..:|..||.|:.:: .:.:|....
Zfish   300 RVSEGLYEMP-VSLSPALAFLLIELLCKIPTRRL---RCLEHFQSHKFFHGMSFDSQLLQRNPIE 360

  Fly   410 PV-------EVR-------SIDDTSNFDEFPDVSLEIPSAP 436
            |:       ::|       |:|...||:  .|: |..||.|
Zfish   361 PILALKTHPDLRERSMRGLSLDLLQNFE--CDL-LNSPSTP 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 OmpH 16..>85 CDD:214922
STKc_NDR_like 91..455 CDD:270750 100/366 (27%)
rskraXP_005157500.1 S_TKc 92..344 CDD:214567 84/305 (28%)
STKc_AGC 97..344 CDD:270693 83/300 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0605
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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