DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trc and stk38

DIOPT Version :9

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:XP_031752645.1 Gene:stk38 / 100379821 XenbaseID:XB-GENE-5742605 Length:497 Species:Xenopus tropicalis


Alignment Length:448 Identity:318/448 - (70%)
Similarity:381/448 - (85%) Gaps:11/448 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IRFSDHTLDKATKAKVTLENYYSNLVTQYGERKQRLAKLEAQLKDESLSEAQRQEKRLQHAQKET 78
            |..|:||.::.|..|:||||:||||:||:.||:.|..:||..:.:|.|.:.:::.:|..||:|||
 Frog    42 ISMSNHTKERVTMTKMTLENFYSNLITQHEERELRQKRLEKAMDEEGLRDEEKRMRRSAHARKET 106

  Fly    79 EYLRLKRLRLGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAERD 143
            |:|||||.|||:||||:|||||||||||||||||||||||||||:|||.||||||||.|:|||||
 Frog   107 EFLRLKRTRLGLEDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKTDMLEKEQVGHIRAERD 171

  Fly   144 VLVEADHQWVVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIH 208
            :|||||..|||||:|||||.:||||||||||||||||||||||||:||.|||||:||.|||||||
 Frog   172 ILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIH 236

  Fly   209 KLGFIHRDIKPDNLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIGTCASLSCSPM 273
            :||||||||||||||||::||:|||||||||||||:|||||||:|:.:.||||       :...|
 Frog   237 QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTDFYRNLNHSLPSDF-------NFQNM 294

  Fly   274 DSKRRAESWKRNRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDNP 338
            :|||:||:||||||.||:|||||||||||||||||||...||||||||||||||:|||||||:.|
 Frog   295 NSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFLQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETP 359

  Fly   339 QDTYRKVMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLKSVPFFRGVDWEHIR 403
            |:||:|||||:||||||||:||||:||:.|:.||||.::|:|:. |:|::|:..||.||||||||
 Frog   360 QETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEQRVGAP-GVEEIKTNHFFEGVDWEHIR 423

  Fly   404 ERPAAIPVEVRSIDDTSNFDEFPDVSLEIPSAPI---PQGGEIAKDWVFINYTYKRFE 458
            |||||||:|::|||||||||||||..:..|...:   |:.....||||||||||||||
 Frog   424 ERPAAIPIEIKSIDDTSNFDEFPDSDILKPMGAVSNHPESEFKNKDWVFINYTYKRFE 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 OmpH 16..>85 CDD:214922 32/68 (47%)
STKc_NDR_like 91..455 CDD:270750 275/366 (75%)
stk38XP_031752645.1 STKc_NDR1 119..494 CDD:270777 280/371 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 481 1.000 Domainoid score I412
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H56033
Inparanoid 1 1.050 665 1.000 Inparanoid score I756
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D216969at33208
OrthoFinder 1 1.000 - - FOG0000273
OrthoInspector 1 1.000 - - otm47455
Panther 1 1.100 - - LDO PTHR24356
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R870
SonicParanoid 1 1.000 - - X595
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1010.190

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