DRSC/TRiP Functional Genomics Resources

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Protein Alignment trc and stk38b

DIOPT Version :9

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:XP_017208958.1 Gene:stk38b / 100332206 ZFINID:ZDB-GENE-081031-2 Length:469 Species:Danio rerio


Alignment Length:453 Identity:313/453 - (69%)
Similarity:384/453 - (84%) Gaps:14/453 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ASIRFSDHTLDKATKAKVTLENYYSNLVTQYGERKQRLAKLEAQLKDESLSEAQRQEKRLQHAQK 76
            :|...|:||.::.|.|||||||:||||:||:.||:.|..|||..:.:|.|.:.:::.:|.|||:|
Zfish     8 SSSLMSNHTKERVTMAKVTLENFYSNLITQHEEREMRQQKLEKVMDEEGLPDEEKRVRRSQHARK 72

  Fly    77 ETEYLRLKRLRLGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAE 141
            |||:|||||.|||::|||:|||||||||||||||||||||||||||:|||||||:||||||:|||
Zfish    73 ETEFLRLKRTRLGLDDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLQKEQVAHIRAE 137

  Fly   142 RDVLVEADHQWVVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDS 206
            ||:||:||..|||||:|||||.:||||:|||||||||||||||||||:||.||||::||.||||.
Zfish   138 RDILVQADSLWVVKMFYSFQDKLNLYLLMEFLPGGDMMTLLMKKDTLTEEETQFYVAETVLAIDF 202

  Fly   207 IHKLGFIHRDIKPDNLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIGTCASLSCS 271
            ||:||||||||||||||||::||:|||||||||||||:|||:|||:|:.::.:|       |:..
Zfish   203 IHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSQSND-------LTFQ 260

  Fly   272 PMDSKRRAESWKRNRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSD 336
            .|:|||:||:||||||.||:||||||||||||||:||||...||||||||||||||:|||||||:
Zfish   261 HMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE 325

  Fly   337 NPQDTYRKVMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLKSVPFFRGVDWEH 401
            .||:||:|||.|:|||:||||:||||.|||.|:.||||||.|:|: .|::|:|...||.|||::|
Zfish   326 TPQETYKKVMGWKETLVFPPEVPISERAKELILRFCCEADHRIGA-GGVDDIKRNAFFEGVDYDH 389

  Fly   402 IRERPAAIPVEVRSIDDTSNFDEFPDVSLEIPSAPI------PQGGEIAKDWVFINYTYKRFE 458
            ||||||||.:|::|||||||||||||..:..|::|:      |:.....||||||||||||||
Zfish   390 IRERPAAITIEIKSIDDTSNFDEFPDSDILQPTSPVVVSNHHPESDYKNKDWVFINYTYKRFE 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 OmpH 16..>85 CDD:214922 36/68 (53%)
STKc_NDR_like 91..455 CDD:270750 266/369 (72%)
stk38bXP_017208958.1 PKc_like 87..465 CDD:304357 271/374 (72%)
S_TKc 89..382 CDD:214567 225/300 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594832
Domainoid 1 1.000 482 1.000 Domainoid score I392
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 667 1.000 Inparanoid score I725
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D216969at33208
OrthoFinder 1 1.000 - - FOG0000273
OrthoInspector 1 1.000 - - otm25356
orthoMCL 1 0.900 - - OOG6_100850
Panther 1 1.100 - - O PTHR24356
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X595
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.900

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