DRSC/TRiP Functional Genomics Resources

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Protein Alignment trc and prkcha

DIOPT Version :10

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_001116528.1 Gene:prkcha / 100144561 ZFINID:ZDB-GENE-080402-5 Length:712 Species:Danio rerio


Alignment Length:423 Identity:133/423 - (31%)
Similarity:214/423 - (50%) Gaps:72/423 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VTLENYYSNLVTQYGERKQR----LAKLEAQLKDESLSEAQRQEKRLQHAQKETEYLRLKRLRLG 89
            |.|.|..:.:..|.|...:|    ||.|:||.:..|:...:.|.|:.|            .|:||
Zfish   295 VELANKLAEMGLQPGGLTKRNSVGLAGLDAQSRTLSVRGERGQSKKEQ------------CLKLG 347

  Fly    90 VEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAERDVL-VEADHQWV 153
            :.:|..|:|:|:|:||:|.||:...:..|:|:|:|:|..:|:.:.|.....|:.|| :.:.|.::
Zfish   348 ISNFTLLQVLGKGSFGKVMLVRLNGSDQVFAVKILKKDIILQDDDVECTMTEKRVLSLASTHPYL 412

  Fly   154 VKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKLGFIHRDIK 218
            .::|..||.|..|:.:|||:.|||:|..:.|.....|...:||.:|...|:..:|..|.::||:|
Zfish   413 TQLYCCFQTPERLFFVMEFVNGGDLMFHIQKSRKFEENRARFYTAEITSALIFLHSKGIVYRDLK 477

  Fly   219 PDNLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIGTCASLSCSPMDSKRRAESWK 283
            .||:|||..||.||:|||:|                  |...|.|......|             
Zfish   478 LDNVLLDKDGHCKLADFGMC------------------KEGMFDGIVTGTFC------------- 511

  Fly   284 RNRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDNPQDTYRKVMNW 348
                       |||||||||:..:..|||:.|||:|||::||||.|:.||.::|..|.:..::. 
Zfish   512 -----------GTPDYIAPEILQELLYGPSVDWWALGVLLYEMLSGHAPFEAENEDDLFESILT- 564

  Fly   349 RETLIFPPEIPISEEAKETIINFCCE-ADRRLG---SQRGLEDLKSVPFFRGVDWEHIRERPAAI 409
             |.:|:...  :|..|.:.:..|..: ..||||   ::.|...:...|||..:||:.:.:|....
Zfish   565 -EEIIYASW--LSTNAVDILKGFLTKNPSRRLGCVATEGGETAVTGHPFFTDIDWDKLDQRALEP 626

  Fly   410 PVE--VRSIDDTSNFDEFPDVSLEIPS-APIPQ 439
            |.:  :::.:|.:|||  ||.:.|.|: .||.:
Zfish   627 PFKPRIKTAEDVNNFD--PDFTQEDPTLTPIDE 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 MobB_Trc-like 24..88 CDD:439274 16/62 (26%)
STKc_NDR_like 91..455 CDD:270750 115/357 (32%)
prkchaNP_001116528.1 C2_PKC_epsilon 3..136 CDD:175981
C1_nPKC_epsilon-like_rpt1 160..223 CDD:410385
C1_nPKC_epsilon-like_rpt2 239..293 CDD:410388
Protein Kinases, catalytic domain 355..678 CDD:473864 113/351 (32%)
Blue background indicates that the domain is not in the aligned region.

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