DRSC/TRiP Functional Genomics Resources

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Protein Alignment trc and lats2

DIOPT Version :9

Sequence 1:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster
Sequence 2:XP_012811721.1 Gene:lats2 / 100124721 XenbaseID:XB-GENE-994907 Length:1117 Species:Xenopus tropicalis


Alignment Length:449 Identity:191/449 - (42%)
Similarity:279/449 - (62%) Gaps:26/449 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 KVTLENYYSNLVTQYGERKQRLAKLEAQLKDESLSEAQRQEKRLQHAQKETEYLRLKRLRLGVED 92
            |..:|.:..|::..|.::..|..:||.::.:..|.||.:::.|....|||:.|.||||.::....
 Frog   633 KFYMEQHVENVLKTYQQKINRRLQLEQEMAEAGLCEAIQEQMRKILYQKESNYNRLKRAKMDKSL 697

  Fly    93 FEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 157
            |..:|.:|.||||||.|..|.||..:||||.|||.|:|.:.|||||:||||:|.|||::||||:|
 Frog   698 FVKIKTLGIGAFGEVCLASKVDTKALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLY 762

  Fly   158 YSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKLGFIHRDIKPDNL 222
            |||||..:||.:|:::||||||:||::.:...|...:|||:|..|||:|:||:|||||||||||:
 Frog   763 YSFQDKDSLYFVMDYIPGGDMMSLLIRMEVFPEHLARFYIAELTLAIESVHKMGFIHRDIKPDNI 827

  Fly   223 LLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAK-----PSDFIGTCASLSCSPMDSKRRAESW 282
            |:|..||:||:|||||||.:.:|.:.:|:..:.|:     ||:.....::..|..........:.
 Frog   828 LIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGNHARQDSMEPSELWDDVSNCRCGDRLKTLEQRAK 892

  Fly   283 KRNRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDNPQDTYRKVMN 347
            :::.|.||:|.||||:||||||.|:.||...|||||:|||::|||:|.|||.:.||.:|..||::
 Frog   893 RQHHRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLASNPTETQLKVIH 957

  Fly   348 WRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLKSVPFFRGVDW-EHIRERPAAIPV 411
            |..||..|.:|.:|.||...|...||.|:.||| :.|.:::|:.|||..:|: ..||.:||....
 Frog   958 WENTLHIPSQINLSPEATNLITALCCGAEDRLG-RNGPDEIKAHPFFISMDFSSDIRHQPAPYVP 1021

  Fly   412 EVRSIDDTSNFDEFPDVSLEIPSAPIPQGGEIAKDW-------------VFINYTYKRF 457
            ::....||||||...:.:      |....|:....|             .|..:|::||
 Frog  1022 KISHPMDTSNFDPVEEEN------PCNDSGDSTVTWDTLMSSGNKHTEHAFYEFTFRRF 1074

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trcNP_001262071.1 OmpH 16..>85 CDD:214922 17/56 (30%)
STKc_NDR_like 91..455 CDD:270750 170/382 (45%)
lats2XP_012811721.1 UBA_LATS2 102..142 CDD:270581
PKc_like 696..1075 CDD:419665 172/386 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 1 1.000 - - FOG0000273
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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