DRSC/TRiP Functional Genomics Resources

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Protein Alignment Deaf1 and gmeb1

DIOPT Version :10

Sequence 1:NP_524169.1 Gene:Deaf1 / 40164 FlyBaseID:FBgn0013799 Length:576 Species:Drosophila melanogaster
Sequence 2:XP_021323796.1 Gene:gmeb1 / 567701 ZFINID:ZDB-GENE-060503-35 Length:590 Species:Danio rerio


Alignment Length:416 Identity:87/416 - (20%)
Similarity:137/416 - (32%) Gaps:152/416 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 VSMGNDLKTIVIQQQQTQPGGGGGGANNAGTNTTATNTIGLNHDGSGSNNSHDSLATLEHAAGGA 192
            |...|..||.:|.|.|....|.|..:|.......|.                             
Zfish    24 VEPDNQSKTQMILQLQPMTAGLGDESNETDAAVVAV----------------------------- 59

  Fly   193 SGVGGGGGGTGGGSSGWSENPSTQHNEVFQIRCKTTCAE-----LYRSKLGSGGRGRCVKYKDKW 252
                              |:..:...|..::....||.|     |::..:..|...|||||:|:.
Zfish    60 ------------------EDEVSAEGEDLELGYPITCGESKAILLFKKFVCPGINVRCVKYEDQL 106

  Fly   253 HTPSEFEHVCGRGSSKDWKRSIKYGGKSLQSLIDEGTLTPHATNCSCTVCCDDEAGESASGPVRL 317
            .:|.:|.|:.|:.:.|||||:|:.||..|:.::|.|.|..:..:..||..|              
Zfish   107 ISPKQFVHMSGKATLKDWKRAIRMGGVMLRKMMDSGQLDFYQHSTLCTNTC-------------- 157

  Fly   318 FTPYKRRKRNQTDLDMESGPKRKRNTHHSNNNNSNTNNNNT----SGSGANNCVDVTAAVAAATA 378
                     ..|..|:..                    |||    .|||.|  ..:|||.....|
Zfish   158 ---------RSTKFDLLI--------------------NNTRFPPDGSGLN--TPITAAEYVFPA 191

  Fly   379 SVVDENNMFLSEENITSKDEPWAALNDSLDTSTELVDQSQMGNTYERETF-------------VV 430
            ..|...|...:......|::...|:..|.|||.:. |.|::..  |..:|             |.
Zfish   192 GHVTVGNGGQAATVEEKKEDVIGAVEWSPDTSDKR-DTSEISE--ETLSFWRGIAEVGLMGEVVS 253

  Fly   431 NI--------------NDGSS-----IAVLDTSQSMKNIEHVYCTM--VKATNDFKRMLNDMKQ- 473
            ||              .|.||     ||||      .|:..|:..:  :|...:.:|.:.|.:| 
Zfish   254 NIRSELLGLLRGVQLRTDQSSLQDAEIAVL------SNLAQVFNLLDSIKQILNVRRQMTDPEQT 312

  Fly   474 -------SFERRIEVLQKERDAAVSA 492
                   :.|:::|..:.::..:.|:
Zfish   313 QVLRTLTTLEQQLEEQKMQQSLSWSS 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Deaf1NP_524169.1 SAND 219..291 CDD:128554 27/76 (36%)
zf-MYND 521..557 CDD:460312
gmeb1XP_021323796.1 SAND 74..144 CDD:460167 26/69 (38%)
Blue background indicates that the domain is not in the aligned region.

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