DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Deaf1 and Deaf1

DIOPT Version :9

Sequence 1:NP_001262069.1 Gene:Deaf1 / 40164 FlyBaseID:FBgn0013799 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_058570.1 Gene:Deaf1 / 54006 MGIID:1858496 Length:566 Species:Mus musculus


Alignment Length:605 Identity:165/605 - (27%)
Similarity:254/605 - (41%) Gaps:139/605 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 AALAEDVVKEEVILESSSHHHHHHHHQLDTKVRMVTSSSNDNSGSGGASGGT-------SGAGGG 75
            ||.|.:...||.:|............:.:.:.|.||:.:...:.||....||       ..|...
Mouse    29 AAAAAESEAEEPVLSRDEDSEEDADSEAERETRRVTAVAVMAAESGHMDMGTEALPSPDEAAAAA 93

  Fly    76 NGGGGVVSVPVSLPIGSMITGTTFNVITPDQLPPHFKPMLCVDNNGYLSGSTVS------MGNDL 134
            .....|.:|.|: .:||    :..||.|..           |.|...:||..:|      :|:.|
Mouse    94 AAFAEVTTVTVA-NVGS----SADNVFTTS-----------VANAASISGHVLSGRTALQIGDSL 142

  Fly   135 KT-----IVIQQQQTQPGGGGGGANNAGTNTTATNTIGLNHDGS----GSNNSHDSLATLEHAAG 190
            .|     ||:.                 |:.:...|.||....:    |..:....||.      
Mouse   143 NTEKATLIVVH-----------------TDGSIVETTGLKGPAAPLTPGPQSPPTPLAP------ 184

  Fly   191 GASGVGGGGGGTGGGSSGWSENPSTQHNEVFQIRCKTTCAELYRSKLGSGGRGRCVKYKDKWHTP 255
                    |...||....|  :||...:|: .:||:.....||:|:|||||||||:|..:.|::|
Mouse   185 --------GQEKGGTKYNW--DPSVYDSEL-PVRCRNISGTLYKSRLGSGGRGRCIKQGENWYSP 238

  Fly   256 SEFEHVCGRGSSKDWKRSIKYGGKSLQSLIDEGTLTPHATNCSCTVCCDDEAGESASGPVRLFTP 320
            :|||.:.||.|||||||||:|.|:.||.||.:|.|.|||.:|:|..||||   .:.|||||||.|
Mouse   239 TEFEAMAGRASSKDWKRSIRYAGRPLQCLIQDGILNPHAASCTCAACCDD---MTLSGPVRLFVP 300

  Fly   321 YKRRKRNQTDLDMESGPKRKRNTHH-------SNNNNSNTNNNNTSGSGA-----NNCVDVTAAV 373
            |||||:..   ::.:.|.:|.:..:       :....:.|.:...:.|||     .:.|:.||.:
Mouse   301 YKRRKKEN---ELPTTPVKKDSPKNITLLPATAATTFTVTPSGQITTSGALTFDRASTVEATAVI 362

  Fly   374 AAATASVVDENNMF----LSEENI-----TSKDEP-WAALNDS----------LDTSTELVDQSQ 418
            :.:.|    :.::|    :.|..:     ....|| :....||          |.||...:..:.
Mouse   363 SESPA----QGDVFAGATVQEAGVQPPCRVGHPEPHYPGYQDSCQIAPFPEAALPTSHPKIVLTS 423

  Fly   419 MGNTYERETFVVNINDGSSIAVLDTSQ--SMKNIEHVYCTMVKATNDFKRMLNDMKQSFERRIEV 481
            :.......:........:.::.|:.|:  |...:|.:..:::......|.:....||:       
Mouse   424 LPALAVPPSTPTKAVSPTVVSGLEMSEHRSWLYLEEMVNSLLNTAQQLKTLFEQAKQA------- 481

  Fly   482 LQKERDAAVSAMRVQVHADIDDPNISGSLHGNEIISAKKCANCNREALAECSLCRKTPYCSEFCQ 546
             ...|:|||:..|:||..:..:               :.|.||.|||::||:.|.|..|||.|||
Mouse   482 -SSCREAAVTQARMQVDTERKE---------------QSCVNCGREAMSECTGCHKVNYCSTFCQ 530

  Fly   547 RKDWNAHQVECTRNPQTTTQ 566
            ||||..||..|.::...|.|
Mouse   531 RKDWKDHQHVCGQSASVTVQ 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Deaf1NP_001262069.1 SAND 219..291 CDD:128554 39/71 (55%)
zf-MYND 521..557 CDD:280009 22/35 (63%)
Deaf1NP_058570.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..62 3/28 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..191 5/31 (16%)
SAND 199..273 CDD:279658 27/73 (37%)
Nuclear localization signal. /evidence=ECO:0000255 300..306 3/5 (60%)
Interaction with LMO4 404..479 12/92 (13%)
zf-MYND 505..541 CDD:280009 9/35 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849142
Domainoid 1 1.000 94 1.000 Domainoid score I7511
eggNOG 1 0.900 - - E1_KOG4333
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 186 1.000 Inparanoid score I3920
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007969
OrthoInspector 1 1.000 - - oto92481
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10237
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5158
SonicParanoid 1 1.000 - - X5913
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.880

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