DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Deaf1 and RAF2

DIOPT Version :10

Sequence 1:NP_524169.1 Gene:Deaf1 / 40164 FlyBaseID:FBgn0013799 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_648889.2 Gene:RAF2 / 39821 FlyBaseID:FBgn0036624 Length:1117 Species:Drosophila melanogaster


Alignment Length:231 Identity:50/231 - (21%)
Similarity:88/231 - (38%) Gaps:68/231 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   337 PKRKRNTHHSNNNNSNTNNNNTSGSGANNCVDVTAAVAA-------ATASVVDENNMFLSEENIT 394
            |.::....||.::|.:..:::|..|.  |..:....:.|       :..|:.|.|:     :| .
  Fly   943 PAKRPKLIHSQDSNQDMASSSTHLSA--NLSETLRKIRAWKNYSHFSNVSMEDNNS-----DN-E 999

  Fly   395 SKDEPWAALNDSLDTSTELVDQSQMGN--TYERETFVVNINDGSSIAVLDTSQSMKNIEHVYCTM 457
            |:.||       |..|:.:..:.|:.|  :|: |....||||..::.....|...|:.:|     
  Fly  1000 SQIEP-------LFNSSPMASRRQLANRQSYQ-EQHSANINDHENVQKRHKSHKRKSHKH----- 1051

  Fly   458 VKATNDFKRMLNDMKQSFERRIEVLQKERDAAVSAMRVQVHADIDDPNISGSLHGNEIISAKKCA 522
                           :|.:.|            |:.:.|..:       |.:::||   :.::|.
  Fly  1052 ---------------KSHKHR------------SSHKSQAES-------SATINGN---TGRQCH 1079

  Fly   523 NCN-REALAECSLCRKTPYCSEFCQRKDWNAHQVEC 557
            .|. ..|...||.|:...|||..||..||:.|...|
  Fly  1080 ECKLYGATFMCSNCQNQWYCSRECQLSDWDTHHRTC 1115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Deaf1NP_524169.1 SAND 219..291 CDD:128554
zf-MYND 521..557 CDD:460312 14/36 (39%)
RAF2NP_648889.2 PAT1 367..>533 CDD:401645
zf-MYND 1078..1115 CDD:460312 14/36 (39%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.