DRSC/TRiP Functional Genomics Resources

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Protein Alignment Deaf1 and gmeb-2

DIOPT Version :9

Sequence 1:NP_001262069.1 Gene:Deaf1 / 40164 FlyBaseID:FBgn0013799 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_001317728.1 Gene:gmeb-2 / 181676 WormBaseID:WBGene00010010 Length:517 Species:Caenorhabditis elegans


Alignment Length:383 Identity:77/383 - (20%)
Similarity:129/383 - (33%) Gaps:117/383 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 GTGGGSSGWSENPSTQHNEVFQIRCKTTCAELYRSKLGS--GGRGRCVKY--KDKWHTPSEFEHV 261
            |..|..:..::..|.....|..::|.|..|::. :||.:  |....|:..  :.::.:|.||...
 Worm    62 GGDGNVNVLAKEASVSLPPVITVKCGTLTAKMV-TKLFTCPGIHQNCILIDGETEYISPKEFTVR 125

  Fly   262 CGRGSSKDWKRSIKYGGKSLQSLIDEGTLTPHATNCSCTVCCDDEAGESASGPVRLFTPYKRRKR 326
            ..:...||||.||:.|..:|::|::..:|..|.....|:..|......:...|..  .|..||:.
 Worm   126 ANKDKQKDWKGSIRIGKSNLRTLMEMRSLDFHDHPNQCSAKCQSRNYITPKDPTS--DPSGRRRS 188

  Fly   327 NQTDL------------------DMESGPKRKR---------NTHHSNNN-------NSNTNNNN 357
            :.|.|                  .:.:.||::.         .|...|..       :.|..|||
 Worm   189 STTKLIPQNMFSHIPSAFPNASTSLFTVPKKETQMPEGQPTLGTLFKNPTFSRFVAISQNMKNNN 253

  Fly   358 TSGSGANNCVDVTAAVAAATASVVDEN--NMF----LSEENITSKDEPWAALNDSLDTSTELVDQ 416
            .|                 |.|...:.  :||    |.||..||.|          |.:|:|:.|
 Worm   254 FS-----------------TPSTTTQPPLSMFPTTSLKEETSTSVD----------DVTTQLLQQ 291

  Fly   417 SQM-----------------------GNTYE-------RETFVVNINDGSSIAVLD--------T 443
            .|.                       .|.|:       :|.....||.|....::|        .
 Worm   292 HQQQRVASTLFQTIPSAQPSTFWNTTDNRYQGNIEQQPQEMLAEMINAGLGDNIIDMIVNKINNM 356

  Fly   444 SQSMKNI---EHVYCTMVKATNDFKRMLNDMKQSFERRIEVLQKERDAAVSAMRVQVH 498
            .:.:|.|   .:|...|:.:.|......|.|:.....:.|:.::|:....|  :.|||
 Worm   357 REKIKGISSCSNVLLKMLCSLNAADTFCNTMQAMESLQAEIAKEEKHLMKS--QPQVH 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Deaf1NP_001262069.1 SAND 219..291 CDD:128554 20/75 (27%)
zf-MYND 521..557 CDD:280009
gmeb-2NP_001317728.1 SAND 80..155 CDD:128554 20/75 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 44 1.000 Domainoid score I8333
eggNOG 1 0.900 - - E1_KOG4333
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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