DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Deaf1 and deaf1

DIOPT Version :9

Sequence 1:NP_001262069.1 Gene:Deaf1 / 40164 FlyBaseID:FBgn0013799 Length:576 Species:Drosophila melanogaster
Sequence 2:XP_004913723.1 Gene:deaf1 / 100137100 XenbaseID:XB-GENE-1216227 Length:478 Species:Xenopus tropicalis


Alignment Length:465 Identity:150/465 - (32%)
Similarity:202/465 - (43%) Gaps:82/465 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 NGYLSGSTVSMGNDLKTIVIQQQQTQPGGGGGGANNAGTNTTATNTIGLNH--DGSGSNNSHDSL 182
            |||...:..|:|             .||      .|..|.:.|:.|...:|  ....:....|||
 Frog    48 NGYAEVTVSSVG-------------APG------ENVFTTSVASATSLSDHVLTDRAALQIGDSL 93

  Fly   183 AT------LEHAAG-----------GASGVGGGGGGTGGGSSG-------WSENPSTQHNEVFQI 223
            :|      :.|..|           .|....|..|.|...|.|       :|.:.|...||: .:
 Frog    94 STEKATLIVVHTDGSIVETQDLKVPSAPMTPGSEGSTTPLSPGPEKDGTKYSWDSSVYDNEL-PV 157

  Fly   224 RCKTTCAELYRSKLGSGGRGRCVKYKDKWHTPSEFEHVCGRGSSKDWKRSIKYGGKSLQSLIDEG 288
            ||:.....||:::|||||||||||:.|.|:||:|.|.:.||.|||||||||:|.|:.||.||.:|
 Frog   158 RCRNISGILYKNRLGSGGRGRCVKHLDGWYTPTEIEAMAGRASSKDWKRSIRYAGRPLQCLIQDG 222

  Fly   289 TLTPHATNCSCTVCCDDEAGESASGPVRLFTPYKRRKRNQTDLDMESGPKRKRNTHHSNNNNSNT 353
            .|||||.:|:|..||||   .|.|||||||.||||||:   :.::.:.|.:|..|.:........
 Frog   223 LLTPHAASCTCAACCDD---LSLSGPVRLFVPYKRRKK---EGELPAVPSKKDPTKNITLLPGTA 281

  Fly   354 NNNNT-SGSGANNCVDVTAAVAAATASVVDENNMFLSEENITSKDEPWAALNDSLDTSTELVDQS 417
            :...| |.||.....|..|...||||..          ..|.|...|...:.......|.|...:
 Frog   282 SATFTVSPSGQITATDSLAFERAATAEA----------SAILSDSPPQGDVYTGPTVLTSLPALA 336

  Fly   418 QMGNTYERETFVVNINDGSSIAVLDTSQSMKNIEHVYCTMVKATNDFKRMLNDMKQSFERRIEVL 482
            ...:|..:||....:|   .:.|.|..:....:|.:..:::......|..::             
 Frog   337 LAPSTPTKETSPGGVN---GLEVSDQQRPWLYLEEMVNSLINTAQQLKSFID------------- 385

  Fly   483 QKERDAAVSAMRVQVHADIDDPNISGSLHGNEIISAKKCANCNREALAECSLCRKTPYCSEFCQR 547
            |.:.:||........|.......|.|.   .||:..:.|.||.||||.||:.|.|..|||.||||
 Frog   386 QAKSEAATDRKEFTGHLFQPADEIDGK---QEILLRQSCVNCGREALNECTGCHKVNYCSIFCQR 447

  Fly   548 KDWNAHQVEC 557
            |||..||..|
 Frog   448 KDWKDHQHLC 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Deaf1NP_001262069.1 SAND 219..291 CDD:128554 40/71 (56%)
zf-MYND 521..557 CDD:280009 23/35 (66%)
deaf1XP_004913723.1 SAND 152..224 CDD:366582 41/72 (57%)
zf-MYND 421..457 CDD:366792 23/35 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 94 1.000 Domainoid score I7379
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 196 1.000 Inparanoid score I3704
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D295114at33208
OrthoFinder 1 1.000 - - FOG0007969
OrthoInspector 1 1.000 - - oto102781
Panther 1 1.100 - - LDO PTHR10237
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5913
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.070

Return to query results.
Submit another query.