DRSC/TRiP Functional Genomics Resources

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Protein Alignment cyc and CBF1

DIOPT Version :10

Sequence 1:NP_524168.2 Gene:cyc / 40162 FlyBaseID:FBgn0023094 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_012594.1 Gene:CBF1 / 853523 SGDID:S000003821 Length:351 Species:Saccharomyces cerevisiae


Alignment Length:97 Identity:27/97 - (27%)
Similarity:51/97 - (52%) Gaps:22/97 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EFCENMEEIEDENYDEEK--------------SARTSDE---NRKQNHSEIEKRRRDKMNTYINE 52
            |..::.|:.:|.:.|.:|              :..|:||   .||.:|.|:|:|||:.:||.||.
Yeast   180 EHQQDDEDNDDADIDLKKDISMQPGRRGRKPTTLATTDEWKKQRKDSHKEVERRRRENINTAINV 244

  Fly    53 LSSMIPMCFAMQRKLDKLTVLRMAVQHLRGIR 84
            ||.::|:     |:..|..:|..|.::::.::
Yeast   245 LSDLLPV-----RESSKAAILACAAEYIQKLK 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cycNP_524168.2 bHLH_SF 31..92 CDD:469605 19/54 (35%)
PAS 111..173 CDD:214512
PAS_11 311..411 CDD:464214
CBF1NP_012594.1 bHLHzip_scCBP1 217..303 CDD:381404 21/60 (35%)
Blue background indicates that the domain is not in the aligned region.

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