DRSC/TRiP Functional Genomics Resources

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Protein Alignment cyc and HIF3A

DIOPT Version :10

Sequence 1:NP_524168.2 Gene:cyc / 40162 FlyBaseID:FBgn0023094 Length:413 Species:Drosophila melanogaster
Sequence 2:XP_016882621.1 Gene:HIF3A / 64344 HGNCID:15825 Length:755 Species:Homo sapiens


Alignment Length:379 Identity:99/379 - (26%)
Similarity:167/379 - (44%) Gaps:83/379 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 TSDENRKQNHSEIEKRRRDKMNTYINELSSMIPMCFAMQRKLDKLTVLRMAVQHLRGIR------ 84
            ::.|.||:...:..:.||.:....:.:|:..:|....:...|||.:::|:.:.:||..|      
Human    54 STTELRKEKSRDAARSRRSQETEVLYQLAHTLPFARGVSAHLDKASIMRLTISYLRMHRLCAAGE 118

  Fly    85 ----GSGSLHPFNGSDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVSDSVSSVLNSTQA 145
                |:|.                :.|....|:|.|||:.|:..: |.:.|:|::||..|..:|.
Human   119 WNQVGAGG----------------EPLDACYLKALEGFVMVLTAE-GDMAYLSENVSKHLGLSQL 166

  Fly   146 DLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDA----KTMLPVKTDVPQSLCRLCPGARRS 206
            :|:|.|.||.:||               |.:|.|.||    :|:...|.:.|...|         
Human   167 ELIGHSIFDFIHP---------------CDQEELQDALTPQQTLSRRKVEAPTERC--------- 207

  Fly   207 FFCRMKLRTASNNQIKEESDTSSSSRSSTKRKSRLTTGHKYRVIQCTGYLKSWTPIKDEDQDADS 271
            |..|||              ::.:||..|......|    ::|:.|:|:::::.| ..:...|.|
Human   208 FSLRMK--------------STLTSRGRTLNLKAAT----WKVLNCSGHMRAYKP-PAQTSPAGS 253

  Fly   272 DEQTTNLSCLVAIGRIPPNVRNSTVPASLDNHPNIRHVLFISRHSGEGKFLFIDQRATLVIGFLP 336
            .:....|.|||.|....|:      |.||:  |.:....|:||||.:.||.:.|.|...|.|:.|
Human   254 PDSEPPLQCLVLICEAIPH------PGSLE--PPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSP 310

  Fly   337 QEILGTSFYEYFHNEDIAALMESHKMVMQVPEKVTTQVYRFRCKDNSYIQLQSE 390
            .:::|.|.|||.|..|..|:.:|...::...:.||.| |||..:...|:..|::
Human   311 DDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQ-YRFLARSGGYLWTQTQ 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cycNP_524168.2 bHLH_SF 31..92 CDD:469605 15/70 (21%)
PAS 111..173 CDD:214512 20/61 (33%)
PAS_11 311..411 CDD:464214 29/80 (36%)
HIF3AXP_016882621.1 bHLH-PAS_HIF3a_PASD7 56..118 CDD:381572 14/61 (23%)
PAS 139..>214 CDD:238075 30/113 (27%)
PAS_11 285..392 CDD:464214 29/80 (36%)
PHA03247 <415..755 CDD:223021
HIF-1 565..595 CDD:463274
Blue background indicates that the domain is not in the aligned region.

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