DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cyc and AHRR

DIOPT Version :10

Sequence 1:NP_524168.2 Gene:cyc / 40162 FlyBaseID:FBgn0023094 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_001364165.1 Gene:AHRR / 57491 HGNCID:346 Length:697 Species:Homo sapiens


Alignment Length:315 Identity:73/315 - (23%)
Similarity:116/315 - (36%) Gaps:104/315 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 YDEEKSARTSDENR------KQNHSEIEKRRRDKMNTYINELSSMIPMCFAMQRKLDKLTVLRMA 76
            |...|..|...:.|      |.|.|   ||.||::|..::.|:|::|....:..|||||:|||::
Human     9 YAGRKRRRPLQKQRPAVGAEKSNPS---KRHRDRLNAELDHLASLLPFPPDIISKLDKLSVLRLS 70

  Fly    77 VQHLR------------------GIRGSGSLHPFNGSDYRPSFLSDQELKMIILQASEGFLFVVG 123
            |.:||                  |....|...|..||    :.|..:    ::|::..||..||.
Human    71 VSYLRVKSFFQVVQEQSSRQPAAGAPSPGDSCPLAGS----AVLEGR----LLLESLNGFALVVS 127

  Fly   124 CDRGRILYVSDSVSSVLNSTQADLLGQSWFDVLHPKDIGKVKEQLSSLEQCPR------------ 176
            .: |.|.|.|.::...|...|.|::.|:.:|.:|..|......||......|:            
Human   128 AE-GTIFYASATIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVFGQPPPLETG 191

  Fly   177 -----ERLIDAK---TMLPVKTDVPQSLCRLC--------------------------------P 201
                 .||:.|:   |..|.:.....:.|.:|                                .
Human   192 DDAILGRLLRAQEWGTGTPTEYSAFLTRCFICRVRCLLDSTSGFLTMQFQGKLKFLFGQKKKAPS 256

  Fly   202 GA----RRSFFC-----------RMKLRTASNNQIKEESDTSSSSRSSTKRKSRL 241
            ||    |.|.||           .||:|:|. .:.|..:||::::.:..|..:.|
Human   257 GAMLPPRLSLFCIAAPVLLPSAAEMKMRSAL-LRAKPRADTAATADAKVKATTSL 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cycNP_524168.2 bHLH_SF 31..92 CDD:469605 25/84 (30%)
PAS 111..173 CDD:214512 18/61 (30%)
PAS_11 311..411 CDD:464214
AHRRNP_001364165.1 bHLH-PAS_AhRR 26..85 CDD:381441 22/61 (36%)
PAS 113..176 CDD:214512 18/67 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.