DRSC/TRiP Functional Genomics Resources

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Protein Alignment cyc and epas1a

DIOPT Version :10

Sequence 1:NP_524168.2 Gene:cyc / 40162 FlyBaseID:FBgn0023094 Length:413 Species:Drosophila melanogaster
Sequence 2:XP_695262.7 Gene:epas1a / 566886 ZFINID:ZDB-GENE-030131-4490 Length:843 Species:Danio rerio


Alignment Length:398 Identity:103/398 - (25%)
Similarity:176/398 - (44%) Gaps:65/398 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 EEKSARTSDENRKQNHSEIEKRRRDKMNTYINELSSMIPMCFAMQRKLDKLTVLRMAVQHL--RG 82
            |.:..|...|.||:...:..:.||.|......||:..:|:..::...|||.:::|:|:..|  |.
Zfish     4 EREKKRHPSERRKEKSRDAARCRRSKETEVFYELAHQLPLPHSISSHLDKASIMRLAISFLRTRK 68

  Fly    83 IRGSG----SLHPFNGSDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVSDSVSSVLNST 143
            :..||    .:...|||          ::..:.|::.|||:.||..| |.::::|::||..:..|
Zfish    69 LFSSGQTVQQMRSQNGS----------QMDNLYLKSLEGFVIVVTSD-GDMIFLSENVSKFMGLT 122

  Fly   144 QADLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLPVKTDVPQSLCRLCPGARRSFF 208
            |.:|.|.|.||..||.|..:::|.||                  :|:....|.........|.||
Zfish   123 QVELTGHSIFDFTHPCDHEEIRENLS------------------IKSGPVYSRKGKEMSTSRDFF 169

  Fly   209 CRMKLRTASNNQIKEESDTSSSSRSSTKRKSRLTTGHKYRVIQCTGYLKSWTPIKDEDQDADSDE 273
            .|||....:..:.......|                  ::|:.|||:|:..:....:.....|:.
Zfish   170 MRMKCTVTNRGRTVNLKSAS------------------WKVLHCTGHLQVCSSRPPQILCGFSEP 216

  Fly   274 QTTNLSCLVAIGRIPPNVRNSTVPASLDNHPNIRHVLFISRHSGEGKFLFIDQRATLVIGFLPQE 338
            ..|.::.|.|     |....|.|...||:.      .|:||||.:.||::.|:|.:.:||:.|:|
Zfish   217 PLTCITMLCA-----PIPHPSNVDTPLDSK------TFMSRHSMDMKFIYCDERVSSLIGYRPEE 270

  Fly   339 ILGTSFYEYFHNEDIAALMESHKMVMQVPEKVTTQVYRFRCKDNSYIQLQSEWRAFKNPWTSEID 403
            :||.|.||:.|..|...:.:||:.:....:.|:.| ||...|:..|:.::::.....|...|:..
Zfish   271 LLGRSVYEFCHALDSENMTKSHQNLCNKGQVVSGQ-YRMLAKNGGYVWVETQATVIYNNRNSQPQ 334

  Fly   404 YIIAKNSV 411
            .||..|.:
Zfish   335 CIICINYI 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cycNP_524168.2 bHLH_SF 31..92 CDD:469605 17/66 (26%)
PAS 111..173 CDD:214512 24/61 (39%)
PAS_11 311..411 CDD:464214 33/99 (33%)
epas1aXP_695262.7 None

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