DRSC/TRiP Functional Genomics Resources

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Protein Alignment cyc and ahrrb

DIOPT Version :10

Sequence 1:NP_524168.2 Gene:cyc / 40162 FlyBaseID:FBgn0023094 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_001029092.1 Gene:ahrrb / 565319 ZFINID:ZDB-GENE-051018-2 Length:573 Species:Danio rerio


Alignment Length:385 Identity:83/385 - (21%)
Similarity:135/385 - (35%) Gaps:124/385 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 NRKQNHSEIEKRRRDKMNTYINELSSMIPMCFAMQRKLDKLTVLRMAVQHLRGIRG--------- 85
            ::|.|.|   ||.||::|..::.|.|::|....:..|||||:|||::|..|| ::.         
Zfish    27 DQKSNPS---KRHRDRLNAELDRLGSLLPFSAEVITKLDKLSVLRLSVSFLR-VKSFFQAVQEKE 87

  Fly    86 --SGSLHPF-NGSDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVSDSVSSVLNSTQADL 147
              |..:.|. ...:.:|..:...    ::||:..||..||..| |.|.|.|.::...|...|.|:
Zfish    88 NHSADVSPTETRKEVQPCVVESD----LLLQSLSGFALVVSSD-GIIFYASSTIIDYLGFHQTDV 147

  Fly   148 LGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLPVKTDVPQSLCRLCPGARRSFFCRMK 212
            :.|..||.:|..:                                           |:.|  |.:
Zfish   148 MHQKVFDYIHVDE-------------------------------------------RQEF--RKQ 167

  Fly   213 LRTASNNQIKEESDTSSSSRSSTKRKSRLTTGHKYRVIQCTGYLKSWTPIKDEDQDADSDEQTTN 277
            :..|.|   ..:.||...          :.|.|.|..               |..|..|.|.|..
Zfish   168 IHWAMN---PGQQDTDED----------VVTAHLYSA---------------EQPDGVSPELTPF 204

  Fly   278 LS-CLVAIGRIPPNVRNSTVPASLDNHPNIRHVLFISRHSGEGKFLFIDQRATLVIGFLPQEILG 341
            |: |.:|..|           ..||:.....::.|    .|..|||...:|.||....||.:   
Zfish   205 LTRCFIARMR-----------CLLDSTSGFLNMQF----QGSLKFLQGQRRRTLSGALLPPQ--- 251

  Fly   342 TSFYEYFHNEDIAALMESHKMVMQVPEKVTTQVYRFRCKDNSYIQLQSEWRAFKNPWTSE 401
                       :|....:..:|:....::..:....:||:.|..:.:...||.:..:.||
Zfish   252 -----------LALFCVAVPLVLPSITELRMKSVTVKCKNRSSGRSEKRQRAPRGSYDSE 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cycNP_524168.2 bHLH_SF 31..92 CDD:469605 23/71 (32%)
PAS 111..173 CDD:214512 18/61 (30%)
PAS_11 311..411 CDD:464214 19/91 (21%)
ahrrbNP_001029092.1 bHLH_SF 26..85 CDD:469605 22/61 (36%)
PAS 110..>183 CDD:395786 25/135 (19%)

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