DRSC/TRiP Functional Genomics Resources

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Protein Alignment cyc and hif1al2

DIOPT Version :10

Sequence 1:NP_524168.2 Gene:cyc / 40162 FlyBaseID:FBgn0023094 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_001012371.3 Gene:hif1al2 / 497283 ZFINID:ZDB-GENE-050211-2 Length:663 Species:Danio rerio


Alignment Length:411 Identity:98/411 - (23%)
Similarity:174/411 - (42%) Gaps:89/411 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 ENYDEEKSARTSDENRKQNHSEIEKRRRDKMNTYINELSSMIPMCFAMQRKLDKLTVLRMAVQ-- 78
            :.:.|:|..|...|.||.......:.||.|.:....||::::|:..:|..:.||.:|:|:.:.  
Zfish    21 QTFIEQKKRRVCTEWRKTCSRLAAQSRRKKESQLFKELTALLPLDLSMDGQRDKASVIRLTIAYL 85

  Fly    79 HLRGIRGSGSLHPFNGSDYRPS-FLSDQELKMIILQASEGFLFVVGCDRGRILYVSDSVSSVLNS 142
            ||||:     |...:....||| .:||:..:..:|.::.|...|:....|::::.:..:::....
Zfish    86 HLRGL-----LDTTDSLMKRPSPGVSDKSHERELLDSALGGFVVLLSLNGKVIFATKGLTTHTGI 145

  Fly   143 TQADLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLPVKTDVPQSLCRLCPGARRSF 207
            .|.||:|:|..:.|||.|..:||:.|:.|                :....||.            
Zfish   146 NQMDLIGRSLLEFLHPCDQMEVKDILTRL----------------IGNQEPQK------------ 182

  Fly   208 FCRMKLRTASNNQIKEESDTSSSSRSSTKRKSRLTTGHKYRVIQCTGYLKSWTPIKDEDQDADSD 272
             |.:.||      ||:..:|.             .||  :::|||:|..:|              
Zfish   183 -CEVFLR------IKKAMNTK-------------LTG--WKIIQCSGKKRS-------------- 211

  Fly   273 EQTTNLSCLVAIGRIPPNVRNSTVPASLDNHPNIRHVLFISRHSGEGKFLFIDQRATLVIGFLPQ 337
            ..|...||||...|:.|....:.|..:|:      ...|:|.||.:..|.:...|...:|||...
Zfish   212 SATPGSSCLVLECRVLPIQEITEVDEALN------ACTFMSVHSPDMTFTYCHSRVVKLIGFRDT 270

  Fly   338 EILGTSFYEYFHNEDIAALMESHKMVMQVPEKVTTQVYRFRCKDNSYIQLQSEWRAFKNPWTSE- 401
            ::||.|.|:|:|..|...:.::|..::. ..:|:|..||...:...|:..:::.....|..|.. 
Zfish   271 DLLGQSVYQYYHPSDCQQIRKAHICLLS-KGQVSTGKYRLLHRYGGYVWAETDASLVCNSQTGVP 334

  Fly   402 -----IDYIIAK----NSVFL 413
                 |:||:::    |..||
Zfish   335 ESVVCINYILSEVEQPNLPFL 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cycNP_524168.2 bHLH_SF 31..92 CDD:469605 18/62 (29%)
PAS 111..173 CDD:214512 17/61 (28%)
PAS_11 311..411 CDD:464214 28/109 (26%)
hif1al2NP_001012371.3 None

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