Protein Alignment cyc and arnt

DIOPT Version :10

• Sequence 1: NP_524168.2
• Gene: cyc / 40162
• FlyBaseID: FBgn0023094
• Length: 413
• Species: Drosophila melanogaster
• Sequence 2: NP_001428910.1
• Gene: arnt / 493634
• ZFINID: ZDB-GENE-060126-7
• Length: 747
• Species: Danio rerio
• Alignment Length: 430
• Identity: 164/430 - (38%)
• Similarity: 249/430 - (57%)
• Gaps: 66/430 - (15%)

  Fly    17 NYDEEKSAR----------TSDENR--KQNHSEIEKRRRDKMNTYINELSSMIPMCFAMQRKLDK 69
            :|::::..:          ::|:.|  ::||||||:|||:||..||.|||.|:|.|.|:.||.||
Zfish    38 DYEDDEGGKLFRCDDDGGGSNDKERFARENHSEIERRRRNKMTAYITELSDMVPACSALARKPDK 102

  Fly    70 LTVLRMAVQHLRGIRGSGSLHPFNGSDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVSD 134
            ||:|||||.|::.:||:|:..  ....|:||||:|||||.:||:|::||||||.|:.||::||||
Zfish   103 LTILRMAVSHMKSLRGTGNTS--TDGTYKPSFLTDQELKHLILEAADGFLFVVSCETGRVVYVSD 165

  Fly   135 SVSSVLNSTQADLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRE-RLIDAKTMLPVKTDVPQSLCR 198
            ||:.|||..|:|.||.|.:|.|||.|:.|::||||:.|..... |::|.||. .||.:..|:..|
Zfish   166 SVTPVLNQAQSDWLGSSLYDQLHPDDVEKLREQLSTTENNNNSGRMLDMKTG-TVKKEGGQATVR 229

  Fly   199 LCPGARRSFFCRMK----------------LRTASNNQIKEESDTSSSSRSSTKRKSRLTTGHKY 247
            :..||||||.|||:                |||.:.|.:....|..                .:|
Zfish   230 MSMGARRSFICRMRCGVCPVEPVSLNRLNFLRTRNRNGLGSAKDGE----------------QQY 278

  Fly   248 RVIQCTGYLKSWTPIKDEDQDADSDEQTTNLSCLVAIGRI-------PPNVRNSTVPASLDNHPN 305
            .|:.||||::||.|......:.::|....|..|||||||:       ..::.|.:||
Zfish   279 VVVHCTGYIRSWPPAGMNLSEEEADNNQGNRFCLVAIGRLQVTCCPSDTSINNISVP-------- 335

  Fly   306 IRHVLFISRHSGEGKFLFIDQRATLVIGFLPQEILGTSFYEYFHNEDIAALMESHKMVMQVPEKV 370
               |.|||||:.:|.:.|:|.|.|..:||..||:||.:..::.|.||...|.:|.:.|:::..:|
Zfish   336 ---VEFISRHNSQGVYTFVDHRCTATVGFQTQELLGKNILDFAHPEDQGLLRDSLQQVVKLRGQV 397

  Fly   371 TTQVYRFRCKDNSYIQLQSEWRAFKNPWTSEIDYIIAKNS 410
            .:.::||:.|...::.:::....|:||::.||:|||..|:
Zfish   398 MSVMFRFQSKSREWVWMRTSSFTFQNPFSEEIEYIICTNT 437

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cyc	NP_524168.2	bHLH_SF	31..92	CDD:469605	36/62 (58%)
		PAS	111..173	CDD:214512	36/61 (59%)
		PAS_11	311..411	CDD:464214	35/100 (35%)
arnt	NP_001428910.1	None