Protein Alignment cyc and bmal1b

DIOPT Version :10

• Sequence 1: NP_524168.2
• Gene: cyc / 40162
• FlyBaseID: FBgn0023094
• Length: 413
• Species: Drosophila melanogaster
• Sequence 2: XP_005166673.1
• Gene: bmal1b / 352935
• ZFINID: ZDB-GENE-030408-1
• Length: 676
• Species: Danio rerio
• Alignment Length: 399
• Identity: 215/399 - (53%)
• Similarity: 292/399 - (73%)
• Gaps: 22/399 - (5%)

  Fly    19 DEEKSARTSDE---NRKQNHSEIEKRRRDKMNTYINELSSMIPMCFAMQRKLDKLTVLRMAVQHL 80
            |::|....:|:   |.::.||:||||||||||::|:||:|::|.|.||.|||||||||||||||:
Zfish   114 DKDKPLGRADQQMKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 178

  Fly    81 RGIRGSGSLHPFNGSDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVSDSVSSVLNSTQA 145
            :.:||:.  :|:..::|:|:||||.|||.:||:|::|||||||||||:||:||:||..:||.:|.
Zfish   179 KTLRGAA--NPYTEANYKPAFLSDDELKHLILKAADGFLFVVGCDRGKILFVSESVYKILNYSQN 241

  Fly   146 DLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLPVKTDVPQSLCRLCPGARRSFFCR 210
            ||:|||.||.||||||.||||||||.:..||||||||||.|||:||:..|..|||.|||||||||
Zfish   242 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVRTDIAPSPSRLCSGARRSFFCR 306

  Fly   211 MKLRTASNNQIK-EESD-TSSSSRSSTKRKSRLTTGHKYRVIQCTGYLKSWTPIK-DEDQDADSD 272
            ||   .:.:.:| |:.| .|:.|:....|||..|       |..|||||||.|.| ..|:|.:.|
Zfish   307 MK---CNRSMVKMEDKDFPSTCSKKKADRKSFCT-------IHSTGYLKSWPPTKMGLDEDNEPD 361

  Fly   273 EQTTNLSCLVAIGRIPPNVRNSTVPASLDNHPNIRHVLFISRHSGEGKFLFIDQRATLVIGFLPQ 337
            .:..||||||||||:.|::    ||..::....::...::|||:.:|||:|:|||||.::.:|||
Zfish   362 NEGCNLSCLVAIGRLHPHI----VPQPVNGDIRVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQ 422

  Fly   338 EILGTSFYEYFHNEDIAALMESHKMVMQVPEKVTTQVYRFRCKDNSYIQLQSEWRAFKNPWTSEI 402
            |:||||||||||.:||..|.|.|:.|:|:.||:.|..|:|:.||.|:|.|:|.|.:|.||||.|:
Zfish   423 ELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINTHCYKFKIKDGSFITLRSRWFSFMNPWTKEV 487

  Fly   403 DYIIAKNSV 411
            :||::.|:|
Zfish   488 EYIVSTNTV 496

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cyc	NP_524168.2	bHLH_SF	31..92	CDD:469605	37/60 (62%)
		PAS	111..173	CDD:214512	44/61 (72%)
		PAS_11	311..411	CDD:464214	54/99 (55%)
bmal1b	XP_005166673.1	bHLH-PAS_ARNTL_PASD3	123..186	CDD:381444	39/64 (61%)
		PAS	205..264	CDD:214512	40/58 (69%)
		PAS_11	395..498	CDD:464214	55/102 (54%)