Sequence 1: | NP_524168.2 | Gene: | cyc / 40162 | FlyBaseID: | FBgn0023094 | Length: | 413 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017444554.1 | Gene: | Arntl / 29657 | RGDID: | 62003 | Length: | 633 | Species: | Rattus norvegicus |
Alignment Length: | 411 | Identity: | 215/411 - (52%) |
---|---|---|---|
Similarity: | 295/411 - (71%) | Gaps: | 17/411 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 FCENMEEIEDENYDEEKSARTSD--ENRKQNHSEIEKRRRDKMNTYINELSSMIPMCFAMQRKLD 68
Fly 69 KLTVLRMAVQHLRGIRGSGSLHPFNGSDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVS 133
Fly 134 DSVSSVLNSTQADLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLPVKTDVPQSLCR 198
Fly 199 LCPGARRSFFCRMKLRTASNNQIKEESDTSSSSRSSTKRKSRLTTGHKYRVIQCTGYLKSWTPIK 263
Fly 264 -DEDQDADSDEQTTNLSCLVAIGRIPPNVRNSTVPASLDNHPNIRHVLFISRHSGEGKFLFIDQR 327
Fly 328 ATLVIGFLPQEILGTSFYEYFHNEDIAALMESHKMVMQVPEKVTTQVYRFRCKDNSYIQLQSEWR 392
Fly 393 AFKNPWTSEIDYIIAKNSVFL 413 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cyc | NP_524168.2 | HLH | 31..84 | CDD:278439 | 35/52 (67%) |
PAS | 111..212 | CDD:279347 | 72/100 (72%) | ||
PAS | 111..173 | CDD:214512 | 44/61 (72%) | ||
PAS_11 | 311..411 | CDD:291273 | 54/99 (55%) | ||
PAS | 311..406 | CDD:238075 | 52/94 (55%) | ||
Arntl | XP_017444554.1 | bHLH-PAS_ARNTL_PASD3 | 74..137 | CDD:381444 | 38/64 (59%) |
PAS | 156..215 | CDD:214512 | 40/58 (69%) | ||
PAS_11 | 346..448 | CDD:405306 | 54/101 (53%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 134 | 1.000 | Domainoid score | I4878 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3561 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H910 | |
Inparanoid | 1 | 1.050 | 419 | 1.000 | Inparanoid score | I1744 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D168098at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000695 | |
OrthoInspector | 1 | 1.000 | - | - | otm44650 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106197 | |
Panther | 1 | 1.100 | - | - | O | PTHR23042 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X2275 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.870 |