Sequence 1: | NP_524168.2 | Gene: | cyc / 40162 | FlyBaseID: | FBgn0023094 | Length: | 413 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_032745.2 | Gene: | Npas2 / 18143 | MGIID: | 109232 | Length: | 816 | Species: | Mus musculus |
Alignment Length: | 418 | Identity: | 129/418 - (30%) |
---|---|---|---|
Similarity: | 195/418 - (46%) | Gaps: | 90/418 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 DENYDEEKSARTSDENRKQNHSEIEKRRRDKMNTYINELSSMIPMCFAMQRKLDKLTVLRMAVQH 79
Fly 80 LRGIRGSGSLHPFN-----------GSDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVS 133
Fly 134 DSVSSVLNSTQADLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLPVKTDVPQSLCR 198
Fly 199 LCPGARRS-----FFCRMKLRTASNNQIKEESDTSSSSRSSTKRKSRLTTGHKYRVIQCTGYLKS 258
Fly 259 WTPIKDEDQDADSDEQTTNLSCLVAIGR---IPPNVRNSTVPASLDNHPNIRHVL--FISRHSGE 318
Fly 319 GKFLFIDQRATLVIGFLPQEILGTSFYEYFHNEDIAALMESHKMVMQVPEKVTTQVYRFRCKDNS 383
Fly 384 YIQLQSEWRAFKNPWTSEIDYIIAKNSV 411 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cyc | NP_524168.2 | HLH | 31..84 | CDD:278439 | 20/52 (38%) |
PAS | 111..212 | CDD:279347 | 31/105 (30%) | ||
PAS | 111..173 | CDD:214512 | 23/61 (38%) | ||
PAS_11 | 311..411 | CDD:291273 | 41/99 (41%) | ||
PAS | 311..406 | CDD:238075 | 40/94 (43%) | ||
Npas2 | NP_032745.2 | bHLH-PAS_NPAS2_PASD4 | 1..77 | CDD:381580 | 30/94 (32%) |
Sufficient for heterodimer formation with ARNTL/BMAL1, E-box binding and for the effect of NADPH. /evidence=ECO:0000269|PubMed:23831463 | 1..61 | 28/78 (36%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..21 | 8/26 (31%) | |||
PAS | 84..195 | CDD:366402 | 40/155 (26%) | ||
PAS_11 | 249..352 | CDD:373151 | 43/103 (42%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 364..431 | ||||
omega_3_PfaA | <440..>740 | CDD:274311 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 610..639 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 685..705 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 742..816 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3561 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |