Sequence 1: | NP_524168.2 | Gene: | cyc / 40162 | FlyBaseID: | FBgn0023094 | Length: | 413 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_032705.2 | Gene: | Ncoa3 / 17979 | MGIID: | 1276535 | Length: | 1403 | Species: | Mus musculus |
Alignment Length: | 379 | Identity: | 95/379 - (25%) |
---|---|---|---|
Similarity: | 162/379 - (42%) | Gaps: | 73/379 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 39 EKRRRDKMNTYINELSSMIPMCFA----MQRKLDKLTVLRMAVQHLRGIRGSG-------SLHPF 92
Fly 93 NGSDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVSDSVSSVLNSTQADLLGQSWFDVLH 157
Fly 158 PKDIGKVKEQLSSLEQCPRERLIDAKTMLPVK-TDVPQSLCRLCPGARRSFFCRMKLRTASNNQI 221
Fly 222 KEESDTSSSSRSSTKRKSRLTTGHKYRVIQCTGYLKSWTPIKDEDQDADSDEQTTNLSCLVAIGR 286
Fly 287 IPPNVRNSTVPASLDNHPNIRHVLFISRHSGEGKFLFIDQ---RATLVIGFLPQEILGTSFYEYF 348
Fly 349 H-NEDIAALMESHKMVMQVPEKVTTQVYRFRCKDNSYIQLQSEWRAFKNPWTSE 401 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cyc | NP_524168.2 | HLH | 31..84 | CDD:278439 | 15/48 (31%) |
PAS | 111..212 | CDD:279347 | 32/101 (32%) | ||
PAS | 111..173 | CDD:214512 | 24/61 (39%) | ||
PAS_11 | 311..411 | CDD:291273 | 27/95 (28%) | ||
PAS | 311..406 | CDD:238075 | 27/95 (28%) | ||
Ncoa3 | NP_032705.2 | bHLH_SF | 33..102 | CDD:381792 | 17/66 (26%) |
PAS | 117..172 | CDD:214512 | 23/61 (38%) | ||
PAS_11 | 262..372 | CDD:373151 | 27/101 (27%) | ||
NCOA_u2 | 451..564 | CDD:374708 | |||
SRC-1 | 608..696 | CDD:370145 | |||
DUF4927 | 714..801 | CDD:374467 | |||
Nuc_rec_co-act | 1056..1103 | CDD:312376 | |||
Med15 | 1094..>1398 | CDD:312941 | |||
DUF1518 | 1270..1326 | CDD:369380 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3561 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |