Sequence 1: | NP_524168.2 | Gene: | cyc / 40162 | FlyBaseID: | FBgn0023094 | Length: | 413 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017174718.1 | Gene: | Ncoa2 / 17978 | MGIID: | 1276533 | Length: | 1517 | Species: | Mus musculus |
Alignment Length: | 433 | Identity: | 105/433 - (24%) |
---|---|---|---|
Similarity: | 181/433 - (41%) | Gaps: | 110/433 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 ENYDEEKSARTSDENRKQNHSEI--------EKRRRDKMNTYINELSSMIPMCFA-------MQR 65
Fly 66 KLDKLTVLRMAVQHLRGIRGSGSLHPFNGSDYRPSFLS-------DQE-LKMIILQASEGFLFVV 122
Fly 123 GCDRGRILYVSDSVSSVLNSTQADLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLP 187
Fly 188 VKTDVPQSLCRLCPGA------RRS---FFCRMKLRTASNNQIKEESDTSSSSRSSTKRKSRLTT 243
Fly 244 GHKYRVIQC--TGYLKSWTPIKDEDQDADSDEQTTNLSCLVAIGRIPPNVRNSTVPASLDNHPNI 306
Fly 307 RHVLFISRHSGEGKFLFID---QRATLVIGFLPQEILGTSFYEYFH----NEDIAALMESHKMVM 364
Fly 365 QVPEKVTTQVYRFRCKDNSYIQLQSEWRAFKNPWTSEIDYIIA 407 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cyc | NP_524168.2 | HLH | 31..84 | CDD:278439 | 20/67 (30%) |
PAS | 111..212 | CDD:279347 | 29/109 (27%) | ||
PAS | 111..173 | CDD:214512 | 20/61 (33%) | ||
PAS_11 | 311..411 | CDD:291273 | 24/104 (23%) | ||
PAS | 311..406 | CDD:238075 | 23/101 (23%) | ||
Ncoa2 | XP_017174718.1 | bHLH-PAS_NCoA2_SRC2 | 28..91 | CDD:381520 | 19/65 (29%) |
PAS | 118..175 | CDD:214512 | 19/60 (32%) | ||
PAS_11 | 268..378 | CDD:405306 | 24/115 (21%) | ||
NCOA_u2 | 463..587 | CDD:406952 | |||
SRC-1 | 636..709 | CDD:400955 | |||
DUF4927 | 731..816 | CDD:406644 | |||
Nuc_rec_co-act | 1076..1120 | CDD:400942 | |||
Med15 | <1130..>1408 | CDD:312941 | |||
DUF1518 | 1284..1341 | CDD:400033 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3561 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |