DRSC/TRiP Functional Genomics Resources

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Protein Alignment cyc and LOC1279488

DIOPT Version :10

Sequence 1:NP_524168.2 Gene:cyc / 40162 FlyBaseID:FBgn0023094 Length:413 Species:Drosophila melanogaster
Sequence 2:XP_061513965.1 Gene:LOC1279488 / 1279488 VectorBaseID:AGAMI1_006591 Length:647 Species:Anopheles gambiae


Alignment Length:491 Identity:111/491 - (22%)
Similarity:198/491 - (40%) Gaps:146/491 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SARTSDENRKQNHSEIEKRRRDKMNTYINELSSMIPMCFAMQRKLDKLTVLRMAVQHLR------ 81
            |||.:.:.:.:|.:   :.||:|.|....||:.::|:..|:..:|||.:::|:...:|:      
Mosquito    19 SARCAMKEKSKNAA---RSRREKENVEFLELAKLLPLPSAITSQLDKASIIRLTTSYLKMRQIFP 80

  Fly    82 -GIR---GSGSLHPFNGSDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVSDSVSSVLNS 142
             |:.   |:...|..||   |.:.:  :||...:||..:||:|||..| |:|.|:|::.|..|..
Mosquito    81 EGLGTAWGTDRNHQPNG---RAANI--KELGSHLLQTLDGFIFVVAPD-GKITYISETASVHLGL 139

  Fly   143 TQADLLGQSWFDVLHPKDIGKVKEQLSSL--EQCPRERLI------------------------- 180
            :|.:|.|.|.::.:|..|    :|:::|:  .|.|...|.                         
Mosquito   140 SQVELTGNSIYEYIHAYD----QEEMASILALQQPHHPLACSAPHNLPTSSTSLNSPNSLGTPWT 200

  Fly   181 ---------------DAKTMLPVK------------------------TDVPQSL-CRL----C- 200
                           :|.:..||.                        ..:||:: |..    | 
Mosquito   201 GTFQVGSSATDSGYNEASSEAPVTLASCQQQQHQQQQQQQQQNHQYYVPSIPQAVKCESTQIHCQ 265

  Fly   201 -----PGAR---------------RSFFCRMKLRTASNNQIKEESDTSSSSRSSTKRKSRLTTGH 245
                 |..|               |:||.||:...|                   ||.:.||:. 
Mosquito   266 QNHHQPNHRHSYSQHQRSYVVDMERNFFLRMRCVLA-------------------KRNAGLTSS- 310

  Fly   246 KYRVIQCTGYLKSWTPIKDEDQDADSDEQTTNLSCLVAIGRIPPNVRNSTVPASLDNHPNIRHVL 310
            .|:||.|:||||: .....|..:........||. |.|:|.        ::..|......::..:
Mosquito   311 GYKVIHCSGYLKA-RVFPHESLNTPGYCCVQNLG-LEAVGH--------SLSPSAATEVKLQQNM 365

  Fly   311 FISRHSGEGKFLFIDQRATLVIGFLPQEILGTSFYEYFHNEDIAALMESHKMVMQVPEKVTTQVY 375
            |:.|.|.:.|.:::|.:.:.:.|:.||:::..:.|:|.|..|:..:.::|:.::| ..:.||..|
Mosquito   366 FMFRASLDMKLIYLDAKVSQLTGYEPQDLIENTLYQYIHASDVVQVRQTHQTLLQ-KGQATTMYY 429

  Fly   376 RFRCKDNSYIQLQSEWRAFKNPWTSEIDYIIAKNSV 411
            ||..|...:..:||......|..:|....|::.|.|
Mosquito   430 RFLTKAGGWRWVQSHATIVHNTRSSRPHCIVSVNYV 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cycNP_524168.2 bHLH_SF 31..92 CDD:469605 17/70 (24%)
PAS 111..173 CDD:214512 22/63 (35%)
PAS_11 311..411 CDD:464214 26/99 (26%)
LOC1279488XP_061513965.1 None

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