DRSC/TRiP Functional Genomics Resources

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Protein Alignment cyc and Arnt2

DIOPT Version :10

Sequence 1:NP_524168.2 Gene:cyc / 40162 FlyBaseID:FBgn0023094 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_031514.3 Gene:Arnt2 / 11864 MGIID:107188 Length:712 Species:Mus musculus


Alignment Length:408 Identity:166/408 - (40%)
Similarity:248/408 - (60%) Gaps:36/408 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 NYDEEKSARTSDENRKQNHSEIEKRRRDKMNTYINELSSMIPMCFAMQRKLDKLTVLRMAVQHLR 81
            ::|:|.....|..:| :||||||:|||:||..||.|||.|:|.|.|:.||.||||:|||||.|::
Mouse    51 DFDDEDGEGPSKFSR-ENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMK 114

  Fly    82 GIRGSGSLHPFNGSD--YRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVSDSVSSVLNSTQ 144
            .:||:|:    ..:|  |:||||::||||.:||:|::||||||..:.||::||||||:.|||..|
Mouse   115 SMRGTGN----KSTDGAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQ 175

  Fly   145 ADLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLPVKTDVPQSLCRLCPGARRSFFC 209
            ::..|.:.::.:||.|:.|::|||.:.|.....|::|.||. .||.:..||..|:|.|:||||.|
Mouse   176 SEWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTG-TVKKEGQQSSMRMCMGSRRSFIC 239

  Fly   210 RMKLRTASNNQIKEESDTSSSSRSSTKRKSRLTTG--------HKYRVIQCTGYLKSWTP----I 262
            ||:...|       ..|....:|.:|.|| |...|        .:|.|:.||||:|:|.|    |
Mouse   240 RMRCGNA-------PLDHLPLNRITTMRK-RFRNGLGPVKEGEAQYAVVHCTGYIKAWPPAGMTI 296

  Fly   263 KDEDQDADSDEQTTNLSCLVAIGRIPPNVRNSTVPASLDNHPNIRHVLFISRHSGEGKFLFIDQR 327
            .:||.|.....:    .|||||||:  .|.:|  |..:|.........|:|||:.:|...|:|.|
Mouse   297 PEEDADVGQGSK----YCLVAIGRL--QVTSS--PVCMDMSGMSVPTEFLSRHNSDGIITFVDPR 353

  Fly   328 ATLVIGFLPQEILGTSFYEYFHNEDIAALMESHKMVMQVPEKVTTQVYRFRCKDNSYIQLQSEWR 392
            ...|||:.||::||....|:.|.||.:.|.||.:.|:::..:|.:.:||||.|:..::.:::...
Mouse   354 CISVIGYQPQDLLGKDILEFCHPEDQSHLRESFQQVVKLKGQVLSVMYRFRTKNREWLLIRTSSF 418

  Fly   393 AFKNPWTSEIDYIIAKNS 410
            .|:||::.||:|:|..|:
Mouse   419 TFQNPYSDEIEYVICTNT 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cycNP_524168.2 bHLH_SF 31..92 CDD:469605 36/60 (60%)
PAS 111..173 CDD:214512 29/61 (48%)
PAS_11 311..411 CDD:464214 37/100 (37%)
Arnt2NP_031514.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..73 9/22 (41%)
bHLH-PAS_ARNT 62..124 CDD:381517 36/66 (55%)
PAS 137..243 CDD:395786 51/106 (48%)
PAS_11 336..436 CDD:464214 36/99 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 573..712
Blue background indicates that the domain is not in the aligned region.

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